RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	MT-CYB	P00156	380 aa	Predicted RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	PRL	P01236	227 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	CELA2B	P08218	269 aa	Predicted RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	MMP2	P08253	660 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ACTR1B	P42025	376 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ACTR1A	P61163	376 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	GABRE	P78334	506 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	MPP3	Q13368	585 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	PRKD1	Q15139	912 aa	Predicted RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	TAZ	Q16635	292 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ISX	Q2M1V0	245 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ZNF569	Q5MCW4	686 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	PERM1	Q5SV97	790 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	CDCP2	Q5VXM1	449 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ZDHHC20	Q5W0Z9	365 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	PDPK2P	Q6A1A2	396 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	DARS2	Q6PI48	645 aa	Known RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	FOXR1	Q6PIV2	292 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC30A9	Q6PML9	568 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	BBS12	Q6ZW61	710 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	MARK2	Q7KZI7	788 aa	Known RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	GPBAR1	Q8TDU6	330 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	CCDC74A	Q96AQ1	378 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	CCDC97	Q96F63	343 aa	Predicted RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ZNF578	Q96N58	590 aa	Predicted RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	TTC25	Q96NG3	672 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	OSBPL8	Q9BZF1	889 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	TRABD	Q9H4I3	376 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	CAAP1	Q9H8G2	361 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	POLR1B	Q9H9Y6	1135 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	THSD1	Q9NS62	852 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	UBP1	Q9NZI7	540 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	VPS18	Q9P253	973 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	TFR2	Q9UP52	801 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	SHOC2	Q9UQ13	582 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	SLC17A4	Q9Y2C5	497 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	RAX	Q9Y2V3	346 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	TMEM98	Q9Y2Y6	226 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	AAR2	Q9Y312	384 aa	Known RBP	10.31	□□□□□ -0.76
UBR1-207	ENST00000568782		U3KQA8	63 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ADAMTS20	P59510	1910 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	FRY	Q5TBA9	3013 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	SPEG	Q15772	3267 aa		10.31	□□□□□ -0.76
UBR1-207	ENST00000568782	ACACA	Q13085	2346 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	GPR89A	B7ZAQ6	455 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	BRINP1	O60477	761 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	EPO	P01588	193 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	RPLP0	P05388	317 aa	Known RBP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	GPR89B	P0CG08	455 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	PECAM1	P16284	738 aa	Predicted RBP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	HLA-DPA1	P20036	260 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	FECH	P22830	423 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	ADCY8	P40145	1251 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	ABCG1	P45844	678 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	LSS	P48449	732 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	POLD2	P49005	469 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	GEM	P55040	296 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	EIF3E	P60228	445 aa	Known RBP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	CTBS	Q01459	385 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	EIF3I	Q13347	325 aa	Known RBP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	GTF2H3	Q13889	308 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	PTPRR	Q15256	657 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	C3orf38	Q5JPI3	329 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	CERCAM	Q5T4B2	595 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	BROX	Q5VW32	411 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	OGFOD3	Q6PK18	319 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	RAD9B	Q6WBX8	426 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	B4GALNT4	Q76KP1	1039 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	CHST15	Q7LFX5	561 aa	Predicted RBP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	LYSMD3	Q7Z3D4	306 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	PIM3	Q86V86	326 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	GAS2L3	Q86XJ1	694 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	CCNJL	Q8IV13	435 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782		Q8N9G6	341 aa	Predicted RBP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	AVL9	Q8NBF6	648 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	ACRBP	Q8NEB7	543 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	GPR156	Q8NFN8	814 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	SPATA22	Q8NHS9	363 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	WDR36	Q8NI36	951 aa	Known RBP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	GDAP1	Q8TB36	358 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	KRT35	Q92764	455 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	AHCYL2	Q96HN2	611 aa	Known RBP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	FCRL5	Q96RD9	977 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	LRRN3	Q9H3W5	708 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	TAAR2	Q9P1P5	351 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	APPL1	Q9UKG1	709 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	PKP3	Q9Y446	797 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	ZNF711	Q9Y462	761 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	DUSP10	Q9Y6W6	482 aa		10.3	□□□□□ -0.76
UBR1-207	ENST00000568782	AKAP13	Q12802	2813 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	CCDC187	A0A096LP49	1063 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782		A0A0U1RQS6	177 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	TAF4	O00268	1085 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	PPFIA2	O75334	1257 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	ATP1A1	P05023	1023 aa	Known RBP	10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	MPO	P05164	745 aa		10.29	□□□□□ -0.76
UBR1-207	ENST00000568782	PIRT	P0C851	137 aa		10.29	□□□□□ -0.76

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