RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ARL13AQ5H913 290 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 C6orf183Q5T699 404 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 KDELC1Q6UW63 502 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TMEM26Q6ZUK4 368 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TFAP2DQ7Z6R9 452 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 BPHLQ86WA6 291 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 PCYOX1LQ8NBM8 494 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 STYXQ8WUJ0 223 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 LPGAT1Q92604 370 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 FBXL8Q96CD0 374 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 NXNL1Q96CM4 212 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 UROC1Q96N76 676 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TCF12Q99081 682 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 PCDHAC1Q9H158 963 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 UNC93B1Q9H1C4 597 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 RABL2AQ9UBK7 228 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-207ENST00000553837 ZDHHC2Q9UIJ5 367 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 MID2Q9UJV3 735 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 TLK1Q9UKI8 766 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 PCDHGA7Q9Y5G6 932 aa12.23□□□□□ -0.45
SHMT2-207ENST00000553837 FAM95CA0A1B0GW59 222 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 HEATR9A2RTY3 570 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 KRBA1A5PL33 1030 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 SOCS2O14508 198 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 INPPL1O15357 1258 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 AQP9O43315 295 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 GRID2O43424 1007 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 SOAT2O75908 522 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 HAPLN1P10915 354 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 PABPC1P11940 636 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 CKMT2P17540 419 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 CCNA2P20248 432 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 NAGLUP54802 743 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TAS2R39P59534 338 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 MAXP61244 160 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TUBA1BP68363 451 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 DSC1Q08554 894 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 PRKAA1Q13131 559 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 STX5Q13190 355 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 ALFQ53S48 1182 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 FAM26DQ5JW98 314 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 FAM219BQ5XKK7 198 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 HMBOX1Q6NT76 420 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TMEM214Q6NUQ4 689 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TRAF7Q6Q0C0 670 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TUBA1AQ71U36 451 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 PTAR1Q7Z6K3 402 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TANKQ92844 425 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 ACDQ96AP0 544 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TAMM41Q96BW9 452 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 SLC39A13Q96H72 371 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 KLHL5Q96PQ7 755 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 OMDQ99983 421 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 POLR1BQ9H9Y6 1135 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 XPR1Q9UBH6 696 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 CNOT6Q9ULM6 557 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 ANKRD6Q9Y2G4 727 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 FRMPD3Q5JV73 1810 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TTC34A8MYJ7 566 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 GJB3O75712 270 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 PIGNO95427 931 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 HSPA1AP0DMV8 641 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 HSPA1BP0DMV9 641 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 MAP4P27816 1152 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 PRKAA2P54646 552 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 GEMP55040 296 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TMBIM6P55061 237 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 WNT3AP56704 352 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 MERTKQ12866 999 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 NFATC3Q12968 1075 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 RBM20Q5T481 1227 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 LIPMQ5VYY2 423 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 LRRC8EQ6NSJ5 796 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 FAM117BQ6P1L5 589 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 CNSTQ6PJW8 725 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 PPHLN1Q8NEY8 458 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 HMCESQ96FZ2 354 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 SCYL1Q96KG9 808 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 B3GALT6Q96L58 329 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 TRIM62Q9BVG3 475 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 ARMC1Q9NVT9 282 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 SMOXQ9NWM0 555 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 GMIPQ9P107 970 aa12.22□□□□□ -0.45
SHMT2-207ENST00000553837 PRG3Q9Y2Y8 225 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 MTF2Q9Y483 593 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 COPG1Q9Y678 874 aaKnown RBP12.22□□□□□ -0.45
SHMT2-207ENST00000553837 C1orf232A0A0U1RR37 186 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 TMEM88BA6NKF7 163 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 E7ENX8 843 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 AP3B1O00203 1094 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 PFDN6O15212 129 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 BCL10O95999 233 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 APOA4P06727 396 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 MMP2P08253 660 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 MYCLP1P12525 358 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-207ENST00000553837 DNAJB2P25686 324 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 FCGRTP55899 365 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 RAB10P61026 200 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 SLC10A7Q0GE19 358 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 SLC12A1Q13621 1099 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms