RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, human

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHORDC1-208	ENST00000533062	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	NRSN1	Q8IZ57	195 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	RNF10	Q8N5U6	811 aa	Known RBP	11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	GPR26	Q8NDV2	337 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CCDC112	Q8NEF3	446 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	FAM46D	Q8NEK8	389 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	HIC2	Q96JB3	615 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	TBATA	Q96M53	351 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	VAT1	Q99536	393 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	TSGA10	Q9BZW7	698 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	FAM83D	Q9H4H8	585 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	GRPEL1	Q9HAV7	217 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	USP29	Q9HBJ7	922 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	MAGEE1	Q9HCI5	957 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	BPIFA1	Q9NP55	256 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	PKD2L2	Q9NZM6	624 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	TRHDE	Q9UKU6	1024 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CNOT6	Q9ULM6	557 aa	Known RBP	11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	PADI4	Q9UM07	663 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	PRKAB1	Q9Y478	270 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	OAS3	Q9Y6K5	1087 aa	Known RBP	11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	USP24	Q9UPU5	2620 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	PLXNB3	Q9ULL4	1909 aa		11.42	□□□□□ -0.58
CHORDC1-208	ENST00000533062	BPTF	Q12830	3046 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	LOC285095	A0A1B0GVY8	99 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	EME2	A4GXA9	379 aa	Predicted RBP	11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	TRABD2B	A6NFA1	517 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062		B4DGG1	531 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	BUD23	O43709	281 aa	Known RBP	11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	ASMTL	O95671	621 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	MT-CO3	P00414	261 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	PSMB4	P28070	264 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	TEAD1	P28347	426 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	KLF1	Q13351	362 aa	Predicted RBP	11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SLC14A2	Q15849	920 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	HENMT1	Q5T8I9	393 aa	Known RBP	11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SLC30A9	Q6PML9	568 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	TMC3	Q7Z5M5	1100 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	NRROS	Q86YC3	692 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	ARL10	Q8N8L6	244 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	MAPK15	Q8TD08	544 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	BLOC1S5	Q8TDH9	187 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SCG3	Q8WXD2	468 aa	Known RBP	11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	ATG4A	Q8WYN0	398 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	GLMN	Q92990	594 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	COX14	Q96I36	57 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	APOL2	Q9BQE5	337 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SPATA16	Q9BXB7	569 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	ABCG4	Q9H172	646 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	GBA3	Q9H227	469 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	DPEP2	Q9H4A9	486 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	RABGEF1	Q9UJ41	708 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CLCA2	Q9UQC9	943 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SLC17A4	Q9Y2C5	497 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	GPSM3	Q9Y4H4	160 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	GOLGA4	Q13439	2230 aa	Known RBP	11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	LRP4	O75096	1905 aa		11.41	□□□□□ -0.58
CHORDC1-208	ENST00000533062	GOLGA6L9	A6NEM1	432 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	GOLGA6L3	A6NEY3	463 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CCDC175	P0C221	793 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CDK4	P11802	303 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	BPI	P17213	487 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	ADCY8	P40145	1251 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	RPIA	P49247	311 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	E2F1	Q01094	437 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CTBS	Q01459	385 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CYP4F3	Q08477	520 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	MPP3	Q13368	585 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SPARCL1	Q14515	664 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	PTPRCAP	Q14761	206 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SLC1A5	Q15758	541 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	LVRN	Q6Q4G3	990 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	NLRP8	Q86W28	1048 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	TAB3	Q8N5C8	712 aa	Predicted RBP	11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	FAM71D	Q8N9W8	422 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CCDC74A	Q96AQ1	378 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CCDC3	Q9BQI4	270 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	FERMT1	Q9BQL6	677 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	TMEM121	Q9BTD3	319 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	FICD	Q9BVA6	458 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	FSD1L	Q9BXM9	530 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	SYNDIG1	Q9H7V2	258 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	ZMIZ1	Q9ULJ6	1067 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	PCDHB1	Q9Y5F3	818 aa		11.4	□□□□□ -0.58
CHORDC1-208	ENST00000533062	CFAP47	Q6ZTR5	3102 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	RGSL1	A5PLK6	1076 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	TAF4	O00268	1085 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	NOBOX	O60393	691 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	DNAJC6	O75061	913 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	USP12	O75317	370 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	STK10	O94804	968 aa	Known RBP	11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	CAPNS1	P04632	268 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	GP1BA	P07359	652 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	IVL	P07476	585 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	TNNT3	P45378	269 aa	Predicted RBP	11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	GDF10	P55107	478 aa		11.39	□□□□□ -0.59
CHORDC1-208	ENST00000533062	ILF3	Q12906	894 aa	Known RBP eCLIP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms