RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 IL17RCQ8NAC3 791 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 OR2T3Q8NH03 318 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 METTL6Q8TCB7 284 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 SIGLEC10Q96LC7 697 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CCDC17Q96LX7 622 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC9A7Q96T83 725 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 NEU1Q99519 415 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 NPAS1Q99742 590 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 APOL4Q9BPW4 351 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 LRRC40Q9H9A6 602 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 BIN3Q9NQY0 253 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 TOPORSQ9NS56 1045 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CROCCQ5TZA2 2017 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CCDC88AQ3V6T2 1871 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 TET3O43151 1660 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 LOC102724428A0A0B4J2F2 783 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 KRBOX1C9JBD0 128 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 SNAP23O00161 211 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 SYNCRIPO60506 623 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 BCAS2O75934 225 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 PDE9AO76083 593 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 ADRB1P08588 477 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 COX5BP10606 129 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 ARF4P18085 180 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 PROZP22891 400 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 COILP38432 576 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 HNF4AP41235 474 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 ACTR1BP42025 376 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC15A1P46059 708 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 CRKP46108 304 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 EPHB1P54762 984 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 SIK1P57059 783 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC25A3Q00325 362 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 AQP6Q13520 282 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 DOC2AQ14183 400 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 SKIV2LQ15477 1246 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 GRK1Q15835 563 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 PPP1R3AQ16821 1122 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 HSF5Q4G112 596 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 TEDDM1Q5T9Z0 273 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 PKN3Q6P5Z2 889 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 CNSTQ6PJW8 725 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 SLCO6A1Q86UG4 719 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 ZDHHC17Q8IUH5 632 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 MPP5Q8N3R9 675 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 KYQ8NBH2 561 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 ELMO1Q92556 727 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 RELTQ969Z4 430 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 C19orf60Q96EN9 201 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 RADILQ96JH8 1075 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 PPP3R2Q96LZ3 170 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 CSPG4P5Q96PW8 444 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 FAM213AQ9BRX8 229 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 TTYH2Q9BSA4 534 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 RTKNQ9BST9 563 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 ENAMQ9NRM1 1142 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 NDRG3Q9UGV2 375 aa10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 MAGED2Q9UNF1 606 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-210ENST00000508216 KIF1BO60333 1816 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 NWD2Q9ULI1 1742 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 MFSD2BA6NFX1 497 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 MPTX1A8MV57 137 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 POC1B-GALNT4F8VUJ3 575 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 STX7O15400 261 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 RGS5O15539 181 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 SIGLEC6O43699 453 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 LILRB5O75023 590 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 CPNE3O75131 537 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 SOX30O94993 753 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ATP6V1E1P36543 226 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ETV5P41161 510 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ETV6P41212 452 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 TAS2R60P59551 318 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 HAND2P61296 217 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 HNRNPKP61978 463 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 OVGP1Q12889 678 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 STX5Q13190 355 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 SGCGQ13326 291 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 SMAD4Q13485 552 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 PTK6Q13882 451 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 MXD4Q14582 209 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 CCDC142Q17RM4 750 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 TUSC1Q2TAM9 212 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 GDPD3Q7L5L3 318 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF786Q8N393 782 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 OXR1Q8N573 874 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ATG16L2Q8NAA4 619 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 PPP1R13LQ8WUF5 828 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ASB12Q8WXK4 309 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 SHC3Q92529 594 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ZSWIM3Q96MP5 696 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 MTG1Q9BT17 334 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ZYG11BQ9C0D3 744 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 DSN1Q9H410 356 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 PIGUQ9H490 435 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 XKR8Q9H6D3 395 aa10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 ESRP2Q9H6T0 727 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-210ENST00000508216 GJB4Q9NTQ9 266 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms