RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SPATA31D3P0C874 917 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 HOXB6P17509 224 aaKnown RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 OR1D2P34982 312 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 SLC26A3P40879 764 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 FOXM1Q08050 763 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 BNIP2Q12982 314 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 LAPTM5Q13571 262 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CCNYL2Q5T2Q4 361 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 BROXQ5VW32 411 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 TMPRSS11AQ6ZMR5 421 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 SPATA31D4Q6ZUB0 917 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PCDH20Q8N6Y1 951 aaKnown RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PIK3C3Q8NEB9 887 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 HERVK_113Q902F9 699 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CERS2Q96G23 380 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 SLC38A3Q99624 504 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 TRIM2Q9C040 744 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CDH7Q9ULB5 785 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PTPRJQ12913 1337 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 XRN1Q8IZH2 1706 aaKnown RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 DDX3XO00571 662 aaKnown RBP eCLIP8.92□□□□□ -0.982e-13■□□□□ 9.3
CTNND1-208ENST00000428599 PRKAR1AP10644 381 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CACNA2D1P54289 1103 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PPP2R2BQ00005 443 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 DMPKQ09013 629 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PIK3R6Q5UE93 754 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ABHD15Q6UXT9 468 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ARHGAP36Q6ZRI8 547 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 C7orf61Q8IZ16 206 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 TOP6BLQ8N6T0 577 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 RDH11Q8TC12 318 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 MPP4Q96JB8 637 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 EFR3BQ9Y2G0 817 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 DYTNA2CJ06 578 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CLDN11O75508 207 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 UBOX5O94941 541 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PLGP00747 810 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CALCAP01258 141 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 NR2F6P10588 404 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 SELPP16109 830 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 BRMS1LQ5PSV4 323 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CPTPQ5TA50 214 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 UNC5AQ6ZN44 842 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PTCHD4Q6ZW05 846 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 OR7A2PQ8NGA2 310 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 SPPL2BQ8TCT7 592 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF75CPQ92670 426 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ACAT2Q9BWD1 397 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 EQTNQ9NQ60 294 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 SAMHD1Q9Y3Z3 626 aaKnown RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 RGS20O76081 388 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 ADSSP30520 456 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 AIF1P55008 147 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 CPSF6Q16630 551 aaKnown RBP eCLIP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF697Q5TEC3 545 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PIH1D2Q8WWB5 315 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 NDNQ99608 321 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SEMA4AQ9H3S1 761 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SPAG4Q9NPE6 437 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 FAM105AQ9NUU6 356 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 DDX18Q9NVP1 670 aaKnown RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 GGA2Q9UJY4 613 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 COL1A2P08123 1366 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PSIP1O75475 530 aaKnown RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 CST1P01037 141 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SAGP10523 405 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 CCKBRP32239 447 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 TTKP33981 857 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 RPIAP49247 311 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PKNOX1P55347 436 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 GMFBP60983 142 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 FUT2Q10981 343 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 DLG1Q12959 904 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 ECM1Q16610 540 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 C15orf59Q2T9L4 293 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 EEF1DP3Q658K8 133 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF730Q6ZMV8 503 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 P4HA3Q7Z4N8 544 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PIGZQ86VD9 579 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 MON1AQ86VX9 555 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 CADM2Q8N3J6 435 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SETD6Q8TBK2 473 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SGCDQ92629 289 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PIGKQ92643 395 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 MTMR8Q96EF0 704 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 ARHGAP9Q9BRR9 750 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 CXorf56Q9H5V9 222 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 CD248Q9HCU0 757 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 BTRCQ9Y297 605 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 DHRS7Q9Y394 339 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 ATXN2Q99700 1313 aaKnown RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SMIM35A0A1B0GVV1 85 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 KLRC4O43908 158 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 TRIM3O75382 744 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 FSBPO95073 299 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SDHAF4Q5VUM1 108 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 DUPD1Q68J44 220 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SPESP1Q6UW49 350 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 CAVIN3Q969G5 261 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms