RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 COL14A1Q05707 1796 aaKnown RBP24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 MCIDASD6RGH6 385 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 LMO2P25791 158 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 LAPTM5Q13571 262 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 C9orf64Q5T6V5 341 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 IL12RB2Q99665 862 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 ASLP04424 464 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 CDH3P22223 829 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 SLC6A2P23975 617 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 RAB30Q15771 203 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 TTMPQ5BVD1 217 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 CUZD1Q86UP6 607 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 CDH19Q9H159 772 aa24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 ZNF490Q9ULM2 529 aaPredicted RBP24.98■■□□□ 1.59
SPIRE1-202ENST00000409402 ABHD14A-ACY1A0A1B0GW23 586 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 FPGTO14772 594 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 COL6A2P12110 1019 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 ITPKBP27987 946 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 CDH13P55290 713 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 EML3Q32P44 896 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 CFAP206Q8IYR0 622 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 ANKRD27Q96NW4 1050 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 TRAF6Q9Y4K3 522 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 TRIM38O00635 465 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 SLC22A3O75751 556 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 BCL10O95999 233 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 ALAS2P22557 587 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 NRSN1Q8IZ57 195 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 TTC29Q8NA56 475 aaPredicted RBP24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 NRP1O14786 923 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 PIAS1O75925 651 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 ZNF671Q8TAW3 534 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 C6orf62Q9GZU0 229 aaPredicted RBP24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 DPEP2Q9H4A9 486 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 PCDHGC4Q9Y5F7 938 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 EFCAB10A6NFE3 127 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 ARHGAP1Q07960 439 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 TOP3AQ13472 1001 aaPredicted RBP24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 ZNF563Q8TA94 476 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 RNASE11Q8TAA1 199 aaKnown RBP24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 TRIM43BA6NCK2 446 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 OR2AG2A6NM03 316 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 TRBC1P01850 177 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 PRG2P13727 222 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 RALGDSQ12967 914 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 USP4Q13107 963 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 NR1D2Q14995 579 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 RSBN1Q5VWQ0 802 aaPredicted RBP24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 SIX5Q8N196 739 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 LEMD2Q8NC56 503 aa24.97■■□□□ 1.59
SPIRE1-202ENST00000409402 ATRNL1Q5VV63 1379 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 ATP6AP2A0A1C7CYW4 349 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 ATP6AP2O75787 350 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 SLC25A3Q00325 362 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 ARMC4Q5T2S8 1044 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 ZSCAN2Q7Z7L9 614 aaPredicted RBP24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 FBXW11Q9UKB1 542 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 GSTK1Q9Y2Q3 226 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 WBP4O75554 376 aaKnown RBP24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 EPHA3P29320 983 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 IGFALSP35858 605 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 ATP12AP54707 1039 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 RAB14P61106 215 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 TIGD5Q53EQ6 642 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 MAGEE2Q8TD90 523 aaPredicted RBP24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 XPNPEP1Q9NQW7 623 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 GPD2P43304 727 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 TMC5Q6UXY8 1006 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 DDX3YO15523 660 aaKnown RBP24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 CDKN2BP42772 138 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 DENND6AQ8IWF6 608 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 LMLNQ96KR4 655 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 GPR21Q99679 349 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 TMEM175Q9BSA9 504 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 TCAF1Q9Y4C2 921 aa24.96■■□□□ 1.59
SPIRE1-202ENST00000409402 KIF1CO43896 1103 aaKnown RBP24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 MED26O95402 600 aa24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 FGFR3P22607 806 aa24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 CDH5P33151 784 aaPredicted RBP24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 POU5F1Q01860 360 aaKnown RBP24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 SPIBQ01892 262 aa24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 DEF8Q6ZN54 512 aa24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 SPATA19Q7Z5L4 167 aa24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 ADAMTS15Q8TE58 950 aa24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 KLHL32Q96NJ5 620 aa24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 NUDT4Q9NZJ9 180 aa24.95■■□□□ 1.59
SPIRE1-202ENST00000409402 MGRN1O60291 552 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 OR10H3O60404 316 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 STK16O75716 305 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 OLFM1Q99784 485 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 TIMM50Q3ZCQ8 353 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 LCN9Q8WX39 176 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 BRINP2Q9C0B6 783 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 CHRAC1Q9NRG0 131 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 CLDND1Q9NY35 253 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 FZD10Q9ULW2 581 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 ZMPSTE24O75844 475 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 BNC1Q01954 994 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 TRIM32Q13049 653 aa24.95■■□□□ 1.58
SPIRE1-202ENST00000409402 RNF43Q68DV7 783 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms