RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 CXorf40AQ8TE69 158 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 C10orf82Q8WW14 230 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 LENG8Q96PV6 779 aaPredicted RBP18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 TWNKQ96RR1 684 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 ZFYVE1Q9HBF4 777 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 ACSS2Q9NR19 701 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CORO1AP31146 461 aaKnown RBP18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 KCNA10Q16322 511 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CPSF7Q8N684 471 aaKnown RBP18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 C1RP00736 705 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CTSEP14091 401 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 ITGA1P56199 1179 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 TBC1D21Q8IYX1 336 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 DCAKDQ8WVC6 231 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 TWIST2Q8WVJ9 160 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 GPR1P46091 355 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 NOGQ13253 232 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 ARHGAP36Q6ZRI8 547 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CRYBG2Q8N1P7 616 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 BPIFB6Q8NFQ5 453 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 BRD9Q9H8M2 597 aa18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CLK4Q9HAZ1 481 aaKnown RBP18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 BAZ2AQ9UIF9 1905 aaKnown RBP18.66■□□□□ 0.58
CNTNAP3B-203ENST00000377561 NFKBIEO00221 500 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 TRAF3Q13114 568 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CROCCP3Q8IVE0 287 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 UXS1Q8NBZ7 420 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 LENG1Q96BZ8 264 aaPredicted RBP18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 HMCESQ96FZ2 354 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 PCDH12Q9NPG4 1184 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 TCRBV7S3A2A0A539 114 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 SELPP16109 830 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 EIF2B2P49770 351 aaKnown RBP18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 LSM12Q3MHD2 195 aaKnown RBP18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 RAET1GQ6H3X3 334 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CERS6Q6ZMG9 384 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 FAM20CQ8IXL6 584 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 PANX1Q96RD7 426 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 LPIN3Q9BQK8 851 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 MAGEH1Q9H213 219 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 MINDY3Q9H8M7 445 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 GMPPBQ9Y5P6 360 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 STYXL1Q9Y6J8 313 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 TRIM43BA6NCK2 446 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 RFXANKO14593 260 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 ACSL4O60488 711 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 GNA12Q03113 381 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 COLGALT2Q8IYK4 626 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 AGAP2Q99490 1192 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 PTPRJQ12913 1337 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CCDC189A1A4V9 331 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 TSPAN19P0C672 248 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 HOXB6P17509 224 aaKnown RBP18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 SLC25A11Q02978 314 aaKnown RBP18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 LDB1Q86U70 411 aaPredicted RBP18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 GPR21Q99679 349 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 POLR1BQ9H9Y6 1135 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 SPATA2Q9UM82 520 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 KCNE2Q9Y6J6 123 aa18.65■□□□□ 0.58
CNTNAP3B-203ENST00000377561 PNMA8CA0A1B0GUJ8 204 aa18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 GABRR2P28476 465 aa18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 ABRQ12979 859 aa18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 BIKQ13323 160 aa18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 ZNF57Q68EA5 555 aaPredicted RBP18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 RBM44Q6ZP01 1051 aaKnown RBP18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 CACTIN-AS1Q8N1I8 211 aa18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 FSTL5Q8N475 847 aaPredicted RBP18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 DDX1Q92499 740 aaKnown RBP18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 AZIN2Q96A70 460 aa18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 HMG20AQ9NP66 347 aa18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 PSME2Q9UL46 239 aa18.64■□□□□ 0.58
CNTNAP3B-203ENST00000377561 NPHS1O60500 1241 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 CDH4P55283 916 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 IL10RBQ08334 325 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 RFX4Q33E94 735 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 ZDHHC20Q5W0Z9 365 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 CLEC20AQ6ZU45 233 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 OR6K2Q8NGY2 324 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 CENPIQ92674 756 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 IDH2P48735 452 aaKnown RBP18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 RFWD3Q6PCD5 774 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 RHBGQ9H310 441 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 C8orf4Q9NR00 106 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 LRRC14BA6NHZ5 514 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 FZD9O00144 591 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 CAPN1P07384 714 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 ITGA2P17301 1181 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 CDC42P60953 191 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 COPZ1P61923 177 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 OGDHQ02218 1023 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 CACNG1Q06432 222 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 KHDC1Q4VXA5 237 aaKnown RBP18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 LMO3Q8TAP4 145 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 FAM53CQ9NYF3 392 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 VPS4AQ9UN37 437 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 N6AMT1Q9Y5N5 214 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 SLC7A4O43246 635 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 UGT1A9O60656 530 aa18.64■□□□□ 0.57
CNTNAP3B-203ENST00000377561 TLX1P31314 330 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms