RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 NOMO2Q5JPE7 1267 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 CCNYL2Q5T2Q4 361 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 ACBD5Q5T8D3 534 aaPredicted RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 OR52K2Q8NGK3 314 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 CASP10Q92851 521 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 ABTB1Q969K4 478 aaPredicted RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 THAP11Q96EK4 314 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 HSPBAP1Q96EW2 488 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 LRCH3Q96II8 777 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 KCTD14Q9BQ13 255 aaPredicted RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 C1QTNF3Q9BXJ4 246 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 TMEM248Q9NWD8 314 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 MIOSQ9NXC5 875 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 EGFL7Q9UHF1 273 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 MRPL42Q9Y6G3 142 aaKnown RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 PTPRDP23468 1912 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 H3BMQ9 156 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 M0QZ92 97 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 ZSCAN9O15535 394 aaPredicted RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 NOL3O60936 208 aaKnown RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 CPNE6O95741 557 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 EPOP01588 193 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 HLA-DPA1P20036 260 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 STT3AP46977 705 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 GSK3BP49841 420 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 CDH13P55290 713 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 SFSWAPQ12872 951 aaKnown RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 NFYCQ13952 458 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 GRB7Q14451 532 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 SIRPB2Q5JXA9 342 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 STAG3L4Q8TBR4 150 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 CYGBQ8WWM9 190 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 LPPQ93052 612 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 KIAA1191Q96A73 305 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 COG8Q96MW5 612 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 BDH2Q9BUT1 245 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 BRINP2Q9C0B6 783 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 IL1RL2Q9HB29 575 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 AIG1Q9NVV5 245 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 LEF1Q9UJU2 399 aaPredicted RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 TLR6Q9Y2C9 796 aa17.64■□□□□ 0.41
RTN4-204ENST00000357732 OAS3Q9Y6K5 1087 aaKnown RBP17.64■□□□□ 0.41
RTN4-204ENST00000357732 ARL5CA6NH57 179 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 SYCE1LA8MT33 242 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 EI24O14681 340 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 FGF1P05230 155 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 HNRNPCP07910 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
RTN4-204ENST00000357732 TSPAN8P19075 237 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 OXTRP30559 389 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 ARSDP51689 593 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 TUBA3CQ13748 450 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 RAB39AQ14964 217 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 C16orf72Q14CZ0 275 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 PDCD4Q53EL6 469 aaKnown RBP17.63■□□□□ 0.41
RTN4-204ENST00000357732 MSANTD2Q6P1R3 559 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 PIM3Q86V86 326 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 PAAF1Q9BRP4 392 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 DERL2Q9GZP9 239 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 TUBB1Q9H4B7 451 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 SP110Q9HB58 689 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 PRDM5Q9NQX1 630 aaPredicted RBP17.63■□□□□ 0.41
RTN4-204ENST00000357732 FLRT1Q9NZU1 646 aa17.63■□□□□ 0.41
RTN4-204ENST00000357732 MARCH4Q9P2E8 410 aaPredicted RBP17.63■□□□□ 0.41
RTN4-204ENST00000357732 M0QZQ0 153 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 STX16O14662 325 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 INPP4BO15327 924 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 CD3EAPO15446 510 aaKnown RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 CHEK2O96017 543 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 CYBBP04839 570 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 ATXN1LP0C7T5 689 aaKnown RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 JUNBP17275 347 aaPredicted RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 SLC5A3P53794 718 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 TMBIM6P55061 237 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 ADARB1P78563 741 aaKnown RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 CLCQ05315 142 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 ITKQ08881 620 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 PFKFB4Q16877 469 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 ZNF549Q6P9A3 640 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 ELMSAN1Q6PJG2 1045 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 FKBP9P1Q75LS8 142 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 ANKRD23Q86SG2 305 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 THEM5Q8N1Q8 247 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 PDPRQ8NCN5 879 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 AARSD1Q9BTE6 412 aaKnown RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 ZYG11BQ9C0D3 744 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 AGO3Q9H9G7 860 aaKnown RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 SPON1Q9HCB6 807 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 ZIM2Q9NZV7 527 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 GMIPQ9P107 970 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 GMPR2Q9P2T1 348 aaKnown RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 SFMBT1Q9UHJ3 866 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 CDC14AQ9UNH5 594 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 TRIP12Q14669 1992 aaPredicted RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 FAM149AA5PLN7 773 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 TNFRSF10BO14763 440 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 TULP3O75386 442 aa17.62■□□□□ 0.41
RTN4-204ENST00000357732 RPP40O75818 363 aaKnown RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 ENO2P09104 434 aaPredicted RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 VARSP26640 1264 aaKnown RBP17.62■□□□□ 0.41
RTN4-204ENST00000357732 CTBSQ01459 385 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms