RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 DSELQ8IZU8 1212 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 VPS37AQ8NEZ2 397 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 NOL11Q9H8H0 719 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 ZDHHC2Q9UIJ5 367 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 MAGEA13PA6NCF6 341 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 C2orf78A6NCI8 922 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 CAPN8A6NHC0 703 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 NBNO60934 754 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 HSPA1AP0DMV8 641 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 HSPA1BP0DMV9 641 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 POLR2LP62875 67 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 BRSK1Q8TDC3 778 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 WDR60Q8WVS4 1066 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 PANX3Q96QZ0 392 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 RERGLQ9H628 205 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 FBRSL1Q9HCM7 1045 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 FAM32AQ9Y421 112 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 PLA2G4EQ3MJ16 856 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 ZYG11AQ6WRX3 759 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 ARMCX6Q7L4S7 300 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 LYSMD3Q7Z3D4 306 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 FAM124AQ86V42 546 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 SERPINA9Q86WD7 417 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 TREML1Q86YW5 311 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 CENPLQ8N0S6 344 aaPredicted RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 STYXQ8WUJ0 223 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 NRBF2Q96F24 287 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 SLC2A13Q96QE2 648 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 PCDH12Q9NPG4 1184 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 EIF2B3Q9NR50 452 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 NKX1-2Q9UD57 310 aaPredicted RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 SCML2Q9UQR0 700 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 A0A0J9YYE9 177 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 H3BMM5 538 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 RASSF9O75901 435 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 LAG3P18627 525 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 GPC1P35052 558 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 ARSDP51689 593 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 PRKAA2P54646 552 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 GSCP56915 257 aaPredicted RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 SLC18A2Q05940 514 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 ACSM2AQ08AH3 577 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 ACSM2BQ68CK6 577 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 MSANTD2Q6P1R3 559 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 NECAB2Q7Z6G3 386 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 ARL10Q8N8L6 244 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 RIN3Q8TB24 985 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 SH3RF2Q8TEC5 729 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 CYB5D2Q8WUJ1 264 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 SMG7Q92540 1137 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 VPS33AQ96AX1 596 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 PCDHAC1Q9H158 963 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 SYNDIG1Q9H7V2 258 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 WDR6Q9NNW5 1121 aaKnown RBP11.79□□□□□ -0.52
DDR1-223ENST00000324771 GJD2Q9UKL4 321 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 LRCH1Q9Y2L9 728 aa11.79□□□□□ -0.52
DDR1-223ENST00000324771 GLYATL1P3A0A0U1RQE8 302 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 TMEM114B3SHH9 223 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 E7ESA3 106 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 CDC7O00311 574 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 WDR47O94967 919 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 FGBP02675 491 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 HNRNPCP07910 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDR1-223ENST00000324771 GDF5P43026 501 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 NEK3P51956 506 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 HIST2H2ACQ16777 129 aaPredicted RBP11.78□□□□□ -0.52
DDR1-223ENST00000324771 HIST2H2AA3Q6FI13 130 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 SDE2Q6IQ49 451 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 SCD5Q86SK9 330 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 STK40Q8N2I9 435 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 TPD52L3Q96J77 140 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 KLHL32Q96NJ5 620 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 YIPF2Q9BWQ6 316 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 KIAA1522Q9P206 1035 aaPredicted RBP11.78□□□□□ -0.52
DDR1-223ENST00000324771 GALPQ9UBC7 116 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 ZNF711Q9Y462 761 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 LRRC14BA6NHZ5 514 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 K7ERQ8 282 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 TBC1D4O60343 1298 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 CYP2A7P20853 494 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 PPM1AP35813 382 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 GPR1P46091 355 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 DMC1Q14565 340 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 SAMD4BQ5PRF9 694 aaKnown RBP11.78□□□□□ -0.52
DDR1-223ENST00000324771 KIAA0930Q6ICG6 404 aaPredicted RBP11.78□□□□□ -0.52
DDR1-223ENST00000324771 RRM2BQ7LG56 351 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 TAS1R1Q7RTX1 841 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 ZNF461Q8TAF7 563 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 TWIST2Q8WVJ9 160 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 SLC7A8Q9UHI5 535 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 POLR3HQ9Y535 204 aaPredicted RBP11.78□□□□□ -0.52
DDR1-223ENST00000324771 AP4S1Q9Y587 144 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 COL4A5P29400 1685 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 BRWD1Q9NSI6 2320 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 UNCXA6NJT0 531 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 PIP5K1BO14986 540 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 COCHO43405 550 aa11.78□□□□□ -0.52
DDR1-223ENST00000324771 NRP2O60462 931 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms