RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 INTS11Q5TA45 600 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 MOB2Q70IA6 237 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 FAM9CQ8IZT9 166 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 IRGQQ8WZA9 623 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 ZUFSPQ96AP4 578 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 BIRC8Q96P09 236 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC29A1Q99808 456 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 TINF2Q9BSI4 451 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 C6orf62Q9GZU0 229 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 NOL6Q9H6R4 1146 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF556Q9HAH1 456 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 ATAD5Q96QE3 1844 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 STRCQ7RTU9 1775 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 SH3PXD2BA1X283 911 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 CLDN25C9JDP6 229 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 VILLO15195 856 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 GRIA2P42262 883 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 ACADVLP49748 655 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 RPL38P63173 70 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 GNA12Q03113 381 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 CSTF3Q12996 717 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 DUSP28Q4G0W2 176 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 CTU1Q7Z7A3 348 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 DEFB132Q7Z7B7 95 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 FEM1CQ96JP0 617 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 GIMAP2Q9UG22 337 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 C9IYK1 514 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 E9PAM4 449 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 CBX4O00257 560 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 KRT6AP02538 564 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 KRT6BP04259 564 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC5A2P31639 672 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 KRT6CP48668 564 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC11A2P49281 568 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 GJA9P57773 515 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 ARHGEF7Q14155 803 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC39A12Q504Y0 691 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 NOL9Q5SY16 702 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 BORAQ6PGQ7 559 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 TAGAPQ8N103 731 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 LILRA2Q8N149 483 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 YTHDF1Q9BYJ9 559 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 CCM2LQ9NUG4 571 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 INTS10Q9NVR2 710 aaKnown RBP12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 KLQ9UEF7 1012 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 ADGRE2Q9UHX3 823 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 PCDHGA7Q9Y5G6 932 aa12.7□□□□□ -0.38
DNMT3A-202ENST00000321117 COL16A1Q07092 1604 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 OR51F1A6NGY5 319 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 PDHXO00330 501 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 MAGEB3O15480 346 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 TFPTP0C1Z6 253 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 S100A3P33764 101 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 GSSP48637 474 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 CRYBB1P53674 252 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 C2CD4AQ8NCU7 369 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 PPP3R2Q96LZ3 170 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 ZFP14Q9HCL3 533 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 CDC14AQ9UNH5 594 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 U3KQV3 271 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 FOXD2O60548 495 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 RPP40O75818 363 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 XPAP23025 273 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 EPHX2P34913 555 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 HTR7P34969 479 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 THPOP40225 353 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 NDST2P52849 883 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 KRR1Q13601 381 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 TRIM60Q495X7 471 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 HSF5Q4G112 596 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 PDCD4Q53EL6 469 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 TECRLQ5HYJ1 363 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 AFTPHQ6ULP2 937 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 PARP8Q8N3A8 854 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF420Q8TAQ5 688 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 ELOVL6Q9H5J4 265 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 MARCH2Q9P0N8 246 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 EBF1Q9UH73 591 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 AP3M1Q9Y2T2 418 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 FAM32AQ9Y421 112 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 NPEPPSL1A6NEC2 478 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 BTBD19C9JJ37 291 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 FFAR3O14843 346 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 GPR42O15529 346 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 TULP3O75386 442 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 BRCC3P46736 316 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 TRAF3Q13114 568 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 RFX4Q33E94 735 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 PAGE2BQ5JRK9 111 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF549Q6P9A3 640 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 RBM12BQ8IXT5 1001 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 GPC2Q8N158 579 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 RTL3Q8N8U3 475 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 ZBTB8BQ8NAP8 495 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 GAB3Q8WWW8 586 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 LINGO1Q96FE5 620 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC45A3Q96JT2 553 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF597Q96LX8 424 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms