RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 OSBPL2Q9H1P3 480 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 CCSER2Q9H7U1 834 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 TMEM181Q9P2C4 612 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 AHSGP02765 367 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 AIF1P55008 147 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 C1QTNF8P60827 252 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 BNIP3Q12983 259 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 ATP1A4Q13733 1029 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 RAB39AQ14964 217 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 TBCELQ5QJ74 424 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 FAM219BQ5XKK7 198 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 C16orf87Q6PH81 154 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 ANKS3Q6ZW76 656 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 RPS27LQ71UM5 84 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 EPHX4Q8IUS5 362 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 CEP97Q8IW35 865 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 ADAMTS16Q8TE57 1224 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 USP33Q8TEY7 942 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 TMEM175Q9BSA9 504 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 POLR1BQ9H9Y6 1135 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 NEU3Q9UQ49 428 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 HS3ST4Q9Y661 456 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 RANBP2P49792 3224 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 K7EPI3 171 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 DFFAO00273 331 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 NPHS1O60500 1241 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 GPC4O75487 556 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 MT-CO1P00395 513 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 HSPA8P11142 646 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 ACADVLP49748 655 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 GSTM4Q03013 218 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 MERTKQ12866 999 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 PSMD5Q16401 504 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 CAMK1DQ8IU85 385 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 CYGBQ8WWM9 190 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 MUC3BQ9H195 1237 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 FBXO44Q9H4M3 255 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 CYP4F12Q9HCS2 524 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 TNFRSF12AQ9NP84 129 aa17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 FNDC1Q4ZHG4 1894 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-201ENST00000316097 RNF103-CHMP3A0A140T963 221 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 FUCA1P04066 466 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 HAPLN1P10915 354 aaPredicted RBP17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 CD68P34810 354 aaPredicted RBP17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 GJA8P48165 433 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 MPP1Q00013 466 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 C10orf120Q5SQS8 335 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 ARTNQ5T4W7 220 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 KCTD11Q693B1 232 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 NANOGP8Q6NSW7 305 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 DENND6AQ8IWF6 608 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 CENPSQ8N2Z9 138 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 MFSD2AQ8NA29 543 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 FBXL20Q96IG2 436 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 GPR78Q96P69 363 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 CLSTN3Q9BQT9 956 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 C11orf49Q9H6J7 331 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 ARMC7Q9H6L4 198 aa17.14■□□□□ 0.34
SCAMP4-201ENST00000316097 MAGEB16A2A368 324 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 NRP2O60462 931 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 SEC24AO95486 1093 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 ZNF12P17014 697 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 NFKB1P19838 968 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 MAGEA11P43364 429 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 LBX1P52954 281 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 ZBTB17Q13105 803 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 CTBP1Q13363 440 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 PIK3R6Q5UE93 754 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 PIWIL4Q7Z3Z4 852 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 OFCC1Q8IZS5 231 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 MRPL46Q9H2W6 279 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 ARMC1Q9NVT9 282 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 DCKP27707 260 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 HCAR3P49019 387 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 NPY2RP49146 381 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 MAPK10P53779 464 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 RAB10P61026 200 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 ELAVL2Q12926 359 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 TFAP2DQ7Z6R9 452 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 ZNF420Q8TAQ5 688 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC25A23Q9BV35 468 aa17.14■□□□□ 0.33
SCAMP4-201ENST00000316097 J3QRK9 145 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 STMN1P16949 149 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 BCAP31P51572 246 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 MFSD6LQ8IWD5 586 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 FBXL8Q96CD0 374 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 GBA3Q9H227 469 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 IL1RL2Q9HB29 575 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 FAM95CA0A1B0GW59 222 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 H7C4K7 107 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 INHBBP09529 407 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 IDO1P14902 403 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 TBX4P57082 545 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 RAB15P59190 212 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 SPIDRQ14159 915 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 BTG3Q14201 252 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 NEDD8Q15843 81 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 INTS11Q5TA45 600 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 C1orf53Q5VUE5 145 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms