RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 AGTP01019 485 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 GM2AP17900 193 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 DUSP3P51452 185 aaPredicted RBP14.05□□□□□ -0.16
TPM4-205ENST00000586833 HK3P52790 923 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 GDF10P55107 478 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 SARNPP82979 210 aaKnown RBP14.05□□□□□ -0.16
TPM4-205ENST00000586833 CDK3Q00526 305 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 TAF1AQ15573 450 aaPredicted RBP14.05□□□□□ -0.16
TPM4-205ENST00000586833 TRIP6Q15654 476 aaKnown RBP14.05□□□□□ -0.16
TPM4-205ENST00000586833 CDKN3Q16667 212 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 PPM1JQ5JR12 505 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 PSAPL1Q6NUJ1 521 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 RANBP10Q6VN20 620 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 GKN2Q86XP6 184 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 HID1Q8IV36 788 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 TRAM1L1Q8N609 369 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 DNAAF3Q8N9W5 541 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 PLA2G15Q8NCC3 412 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 BRSK1Q8TDC3 778 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 LMX1AQ8TE12 382 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 FUBP1Q96AE4 644 aaKnown RBP14.05□□□□□ -0.16
TPM4-205ENST00000586833 HIC2Q96JB3 615 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 RUNDC3BQ96NL0 473 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 PLEKHG4BQ96PX9 1271 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 RAB6BQ9NRW1 208 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 PCOLCE2Q9UKZ9 415 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 APOBEC2Q9Y235 224 aaKnown RBP14.05□□□□□ -0.16
TPM4-205ENST00000586833 SAR1BQ9Y6B6 198 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 GVINP1Q7Z2Y8 2422 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 VPS13AQ96RL7 3174 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 SPAG17Q6Q759 2223 aa14.05□□□□□ -0.16
TPM4-205ENST00000586833 USP27XA6NNY8 438 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 SCAMP1O15126 338 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 TNFSF14O43557 240 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 SDC3O75056 442 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 TRIM16O95361 564 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 LDOC1O95751 146 aaPredicted RBP14.04□□□□□ -0.16
TPM4-205ENST00000586833 ANXA6P08133 673 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 PIRTP0C851 137 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 CDK4P11802 303 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 DGKAP23743 735 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 ADRA1AP35348 466 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 SPAM1P38567 509 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 HADHAP40939 763 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 RPIAP49247 311 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 FNTAP49354 379 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 EIF2B5Q13144 721 aaKnown RBP14.04□□□□□ -0.16
TPM4-205ENST00000586833 SIX1Q15475 284 aaPredicted RBP14.04□□□□□ -0.16
TPM4-205ENST00000586833 ZNF542PQ5EBM4 170 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 RD3Q7Z3Z2 195 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 PHYKPLQ8IUZ5 450 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 KLHDC8BQ8IXV7 354 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 EID2Q8N6I1 236 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 DTX3LQ8TDB6 740 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 C19orf43Q9BQ61 176 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 ARNT2Q9HBZ2 717 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 NLGN3Q9NZ94 848 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 APPL1Q9UKG1 709 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 DGKBQ9Y6T7 804 aa14.04□□□□□ -0.16
TPM4-205ENST00000586833 GPR89AB7ZAQ6 455 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 TPP1O14773 563 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 METTL18O95568 372 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 ASMTLO95671 621 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 GPR89BP0CG08 455 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 LPOP22079 712 aaPredicted RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 CASQ1P31415 396 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 CHRNA4P43681 627 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 BASP1P80723 227 aaKnown RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 FOXK2Q01167 660 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 CDH17Q12864 832 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 ILF3Q12906 894 aaKnown RBP eCLIP14.03□□□□□ -0.16
TPM4-205ENST00000586833 BNIP3Q12983 259 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 SEMA5AQ13591 1074 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 ITGA9Q13797 1035 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 GTF2H3Q13889 308 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 PTPRRQ15256 657 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 SHBQ15464 509 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 PRRT3Q5FWE3 981 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 HENMT1Q5T8I9 393 aaKnown RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 PAPD7Q5XG87 772 aaKnown RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 ALS2CLQ60I27 953 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 LVRNQ6Q4G3 990 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 GLRX5Q86SX6 157 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 PDCD7Q8N8D1 485 aaKnown RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 PRELID2Q8N945 189 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 ZNF548Q8NEK5 533 aaPredicted RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 OR4C6Q8NH72 309 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 SCAMP4Q969E2 229 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 CNDP2Q96KP4 475 aaKnown RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 SMIM14Q96QK8 99 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 APOL2Q9BQE5 337 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 ZCCHC2Q9C0B9 1178 aaKnown RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 RMI1Q9H9A7 625 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 ETNK1Q9HBU6 452 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 EIF2B3Q9NR50 452 aaKnown RBP14.03□□□□□ -0.16
TPM4-205ENST00000586833 NUP205Q92621 2012 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 USP34Q70CQ2 3546 aa14.03□□□□□ -0.16
TPM4-205ENST00000586833 TNRC6BQ9UPQ9 1833 aaKnown RBP14.02□□□□□ -0.16
TPM4-205ENST00000586833 GLYATL1P3A0A0U1RQE8 302 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms