RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 SH3BGRP55822 239 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 C1QTNF8P60827 252 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PDK3Q15120 406 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 SLC8B1Q6J4K2 584 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 ISCA2Q86U28 154 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 SLC22A9Q8IVM8 553 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 CARNMT1Q8N4J0 409 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 PTGR2Q8N8N7 351 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 ZNF599Q96NL3 588 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 RNF38Q9H0F5 515 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 BPIFA1Q9NP55 256 aa13.66□□□□□ -0.22
SRSF1-205ENST00000582730 FNDC1Q4ZHG4 1894 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-205ENST00000582730 STX16-NPEPL1H3BU86 382 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 SNAP91O60641 907 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 NDUFS3O75489 264 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 SIX3O95343 332 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-205ENST00000582730 TWF1Q12792 350 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 PTPRRQ15256 657 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 PFKFB4Q16877 469 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 PGM2L1Q6PCE3 622 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 BNC2Q6ZN30 1099 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-205ENST00000582730 NSMCE3Q96MG7 304 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 PSKH2Q96QS6 385 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 ZBTB26Q9HCK0 441 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 PCDH10Q9P2E7 1040 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 SCN5AQ14524 2016 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 UBXN8O00124 270 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 SRP72O76094 671 aaKnown RBP13.65□□□□□ -0.22
SRSF1-205ENST00000582730 EPOP01588 193 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 RAG1P15918 1043 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 MTTPP55157 894 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 SETD3Q86TU7 594 aaPredicted RBP13.65□□□□□ -0.22
SRSF1-205ENST00000582730 AUTS2Q8WXX7 1259 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 SERPINI1Q99574 410 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 CLSTN3Q9BQT9 956 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 CCDC167Q9P0B6 97 aa13.65□□□□□ -0.22
SRSF1-205ENST00000582730 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
SRSF1-205ENST00000582730 hCG_2014768A0A024R1R8 64 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 LRRC14BA6NHZ5 514 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 H0Y626 953 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 C1RP00736 705 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 MBL2P11226 248 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 FDXRP22570 491 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 CHN2P52757 468 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 STC1P52823 247 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 MTA1Q13330 715 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 FBXL19Q6PCT2 694 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 WDR41Q9HAD4 459 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 TRAF6Q9Y4K3 522 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 YIPF1Q9Y548 306 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 RAI2Q9Y5P3 530 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 A0A1B0GVM2 712 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 TCAF2A6NFQ2 919 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 H3BNC9 293 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 KDELR3O43731 214 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 SUPT3HO75486 399 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 ZNF37AP17032 561 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 HMGA1P17096 107 aaKnown RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 THOP1P52888 689 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 TNK2Q07912 1038 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 VEPH1Q14D04 833 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 TRIP10Q15642 601 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 UGT2A3Q6UWM9 527 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 RAB44Q7Z6P3 723 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 JADE3Q92613 823 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 DGCR14Q96DF8 476 aaKnown RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 IGSF21Q96ID5 467 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 GSTO2Q9H4Y5 243 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 EFCAB1Q9HAE3 211 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 AFF4Q9UHB7 1163 aaKnown RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 NCF1BA6NI72 391 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 C2orf81A6NN90 581 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 NCF1CA8MVU1 366 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 UBDO15205 165 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 FKTNO75072 461 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 CSPG5O95196 566 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 NCF1P14598 390 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 CD1DP15813 335 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 AGKQ53H12 422 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 ZRANB3Q5FWF4 1079 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 ADGRF1Q5T601 910 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 ISLR2Q6UXK2 745 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 MDGA1Q8NFP4 955 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 ZNF461Q8TAF7 563 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 PLD4Q96BZ4 506 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 FAR2Q96K12 515 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 TRIB3Q96RU7 358 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 ZBED2Q9BTP6 218 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 SARS2Q9NP81 518 aaKnown RBP13.64□□□□□ -0.23
SRSF1-205ENST00000582730 ADA2Q9NZK5 511 aa13.64□□□□□ -0.23
SRSF1-205ENST00000582730 H3BMM5 538 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 UBFD1O14562 309 aaKnown RBP13.63□□□□□ -0.23
SRSF1-205ENST00000582730 TBL1XO60907 577 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 HDCP19113 662 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 IMPDH1P20839 514 aa13.63□□□□□ -0.23
SRSF1-205ENST00000582730 NME5P56597 212 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms