RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CDK3Q00526 305 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 SLC6A3Q01959 620 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 GCNT1Q02742 428 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 HHEXQ03014 270 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 MEA1Q16626 185 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 MARK2Q7KZI7 788 aaKnown RBP11.8□□□□□ -0.52
SMAD3-206ENST00000558739 TRIM74Q86UV6 250 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 RHOT1Q8IXI2 618 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 THAP4Q8WY91 577 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 BARD1Q99728 777 aaKnown RBP11.8□□□□□ -0.52
SMAD3-206ENST00000558739 TEX101Q9BY14 249 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-206ENST00000558739 OGFRQ9NZT2 677 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 SLC17A4Q9Y2C5 497 aa11.8□□□□□ -0.52
SMAD3-206ENST00000558739 GOLGA6L3A6NEY3 463 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 C21orf140B9A014 251 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 KDELR3O43731 214 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 KIF1CO43896 1103 aaKnown RBP11.79□□□□□ -0.52
SMAD3-206ENST00000558739 RAMP2O60895 175 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 SPAG6O75602 509 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 RECKO95980 971 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 ANKRD34CP0C6C1 535 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 TNFAIP3P21580 790 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 VARSP26640 1264 aaKnown RBP11.79□□□□□ -0.52
SMAD3-206ENST00000558739 CLCN1P35523 988 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 SUOXP51687 545 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 RAD51Q06609 339 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 ACOX1Q15067 660 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 CYTH1Q15438 398 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 CRB2Q5IJ48 1285 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 FJX1Q86VR8 437 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 ZNF354CQ86Y25 554 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 ZNF295-AS1Q8N0V1 137 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 ADAMTS17Q8TE56 1095 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 NUS1Q96E22 293 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 PGAP3Q96FM1 320 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-206ENST00000558739 NSMCE3Q96MG7 304 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 PLCB1Q9NQ66 1216 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 PHPT1Q9NRX4 125 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-206ENST00000558739 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMAD3-206ENST00000558739 PPARGC1AQ9UBK2 798 aaKnown RBP11.79□□□□□ -0.52
SMAD3-206ENST00000558739 ARMCX3Q9UH62 379 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-206ENST00000558739 PADI1Q9ULC6 663 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 TMEM98Q9Y2Y6 226 aa11.79□□□□□ -0.52
SMAD3-206ENST00000558739 PRRC2AP48634 2157 aaKnown RBP11.79□□□□□ -0.52
SMAD3-206ENST00000558739 FN1P02751 2386 aaKnown RBP11.78□□□□□ -0.52
SMAD3-206ENST00000558739 TLN2Q9Y4G6 2542 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 CXorf51AA0A1B0GTR3 108 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 HEATR9A2RTY3 570 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 GOLGA6CA6NDK9 693 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 GOLGA6BA6NDN3 693 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 BECN2A8MW95 431 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 MED7O43513 233 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 PLEKP08567 350 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-206ENST00000558739 GOLGA6DP0CG33 693 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 PTPN4P29074 926 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 ETFBP38117 255 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 MAPKAPK2P49137 400 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 APBA1Q02410 837 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 C2CD6Q53TS8 623 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 CFAP58Q5T655 872 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 AFMIDQ63HM1 303 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 DENND2CQ68D51 928 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 GJB7Q6PEY0 223 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 BRAT1Q6PJG6 821 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 ZNF397Q8NF99 534 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-206ENST00000558739 C9orf72Q96LT7 481 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 COQ10AQ96MF6 247 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 ZNF396Q96N95 335 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-206ENST00000558739 TGM7Q96PF1 710 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 OR2M4Q96R27 311 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 TMEM248Q9NWD8 314 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 GOLGA6AQ9NYA3 693 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 GPR83Q9NYM4 423 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 COPG2Q9UBF2 871 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 HPCAL4Q9UM19 191 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 B3GNT3Q9Y2A9 372 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 PRKAB1Q9Y478 270 aa11.78□□□□□ -0.52
SMAD3-206ENST00000558739 RTTNQ86VV8 2226 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 A0A0U1RQS6 177 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 PRICKLE3O43900 615 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-206ENST00000558739 LRIG2O94898 1065 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 NADKO95544 446 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-206ENST00000558739 IVLP07476 585 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 CCNYL3P0C7X3 344 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 TYRP1P17643 537 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 ITGA3P26006 1051 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 ETV3P41162 512 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 KCNAB1Q14722 419 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 PTPRRQ15256 657 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 CNGA3Q16281 694 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 SLC25A52Q3SY17 297 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 ANO6Q4KMQ2 910 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 PWWP2BQ6NUJ5 590 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 DPPA4Q7L190 304 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 BNIPLQ7Z465 357 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 CDH24Q86UP0 819 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 CUZD1Q86UP6 607 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 ST6GALNAC3Q8NDV1 305 aa11.77□□□□□ -0.53
SMAD3-206ENST00000558739 NANOS1Q8WY41 292 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms