RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CSTL1Q9H114 145 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 SDF2L1Q9HCN8 221 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 C9orf78Q9NZ63 289 aaPredicted RBP6.49□□□□□ -1.37
PCNX1-205ENST00000553508 GJD2Q9UKL4 321 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 MKLN1Q9UL63 735 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 ZNF711Q9Y462 761 aa6.49□□□□□ -1.37
PCNX1-205ENST00000553508 AKR1B15C9JRZ8 316 aaPredicted RBP6.48□□□□□ -1.37
PCNX1-205ENST00000553508 IL7RP16871 459 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 CDAP32320 146 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 CLCNKAP51800 687 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 FUT6P51993 359 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 HNRNPH2P55795 449 aaKnown RBP6.48□□□□□ -1.37
PCNX1-205ENST00000553508 GORABQ5T7V8 394 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 STPG1Q5TH74 334 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 GGNBP1Q5YKI7 109 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 ACAD10Q6JQN1 1059 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 DSTYKQ6XUX3 929 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 SLC9B2Q86UD5 537 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 ARMC8Q8IUR7 673 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 WDR63Q8IWG1 891 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 KBTBD3Q8NAB2 608 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 BBS10Q8TAM1 723 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 GTF3C6Q969F1 213 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 FEM1CQ96JP0 617 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 TTC14Q96N46 770 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 AGXT2Q9BYV1 514 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 MMP25Q9NPA2 562 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 MDFICQ9P1T7 246 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 UTYO14607 1347 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 CGNL1Q0VF96 1302 aa6.48□□□□□ -1.37
PCNX1-205ENST00000553508 ADCY10Q96PN6 1610 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 LINC01565O15544 149 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 UMODP07911 640 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 IL15P40933 162 aaPredicted RBP6.47□□□□□ -1.37
PCNX1-205ENST00000553508 CLCN3P51790 818 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 DUS1LQ6P1R4 473 aaKnown RBP6.47□□□□□ -1.37
PCNX1-205ENST00000553508 GDPD4Q6W3E5 623 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 HMGCLL1Q8TB92 370 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 MTERF1Q99551 399 aaKnown RBP6.47□□□□□ -1.37
PCNX1-205ENST00000553508 IFIH1Q9BYX4 1025 aaKnown RBP6.47□□□□□ -1.37
PCNX1-205ENST00000553508 SPRY4Q9C004 299 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 MCM9Q9NXL9 1143 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 HAO1Q9UJM8 370 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 POU2F3Q9UKI9 436 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 INTS6Q9UL03 887 aaKnown RBP6.47□□□□□ -1.37
PCNX1-205ENST00000553508 GTF2A1LQ9UNN4 478 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 CAPN7Q9Y6W3 813 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 DIP2BQ9P265 1576 aa6.47□□□□□ -1.37
PCNX1-205ENST00000553508 EIF3CLB5ME19 914 aaKnown RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 VCYO14598 125 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 FTCDO95954 541 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 CDH1P12830 882 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 DDX5P17844 614 aaKnown RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 PTPRGP23470 1445 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 RRM1P23921 792 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 EPHA8P29322 1005 aaPredicted RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 GNL1P36915 607 aaPredicted RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 RAD23BP54727 409 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 EIF3BP55884 814 aaKnown RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 PDE1BQ01064 536 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 TROAPQ12815 778 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 KCNT1Q5JUK3 1230 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 OR13A1Q8NGR1 328 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 LNX1Q8TBB1 728 aaPredicted RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 ORAI1Q96D31 301 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 NR1H4Q96RI1 486 aaPredicted RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 PCYT2Q99447 389 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 SH3GL2Q99962 352 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 PRKRIP1Q9H875 184 aaPredicted RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 BRF2Q9HAW0 419 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 PCDH9Q9HC56 1237 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 UBN1Q9NPG3 1134 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 RALYQ9UKM9 306 aaKnown RBP6.46□□□□□ -1.38
PCNX1-205ENST00000553508 PADI1Q9ULC6 663 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 LOXL2Q9Y4K0 774 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 KDM6BO15054 1643 aa6.46□□□□□ -1.38
PCNX1-205ENST00000553508 IQGAP2Q13576 1575 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 A0A0B4J293 547 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 EGFP01133 1207 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 CRYAAP02489 173 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 ATP1A3P13637 1013 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 KRT10P13645 584 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 HLA-DOBP13765 273 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 S1PR1P21453 382 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 MCM3P25205 808 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 MT3P25713 68 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 ARL1P40616 181 aaPredicted RBP6.45□□□□□ -1.38
PCNX1-205ENST00000553508 PIP4K2AP48426 406 aaPredicted RBP6.45□□□□□ -1.38
PCNX1-205ENST00000553508 GFI1BQ5VTD9 330 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 PLEKHA7Q6IQ23 1121 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 TSSK4Q6SA08 328 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 PQLC2Q6ZP29 291 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 FOXL2NBQ6ZUU3 175 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 LMNTD1Q8N9Z9 388 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 MAGEC3Q8TD91 643 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 PSPC1Q8WXF1 523 aaKnown RBP6.45□□□□□ -1.38
PCNX1-205ENST00000553508 ABTB1Q969K4 478 aaPredicted RBP6.45□□□□□ -1.38
PCNX1-205ENST00000553508 CDCA5Q96FF9 252 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 SLC28A3Q9HAS3 691 aa6.45□□□□□ -1.38
PCNX1-205ENST00000553508 PREBQ9HCU5 417 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms