RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 AEBP2Q6ZN18 517 aaPredicted RBP37.75■■■■□ 3.63
PCNX1-205ENST00000553508 CHIC1Q5VXU3 224 aa36.7■■■■□ 3.47
PCNX1-205ENST00000553508 PHF23Q9BUL5 403 aaPredicted RBP32.3■■■□□ 2.76
PCNX1-205ENST00000553508 SENP3Q9H4L4 574 aaPredicted RBP32■■■□□ 2.71
PCNX1-205ENST00000553508 FOXD1Q16676 465 aa29.77■■■□□ 2.36
PCNX1-205ENST00000553508 PLPPR3Q6T4P5 718 aa29.74■■■□□ 2.35
PCNX1-205ENST00000553508 ADRA2BP18089 450 aa28.57■■■□□ 2.16
PCNX1-205ENST00000553508 PPP6R1Q9UPN7 881 aa28.57■■■□□ 2.16
PCNX1-205ENST00000553508 PIAS4Q8N2W9 510 aaPredicted RBP28.07■■■□□ 2.08
PCNX1-205ENST00000553508 MSH5O43196 834 aa27.44■■□□□ 1.98
PCNX1-205ENST00000553508 PPP4R3CPQ6ZMV5 832 aa26.24■■□□□ 1.79
PCNX1-205ENST00000553508 SCAF1Q9H7N4 1312 aaKnown RBP26.06■■□□□ 1.76
PCNX1-205ENST00000553508 MAPK8IP2Q13387 824 aaPredicted RBP25.98■■□□□ 1.75
PCNX1-205ENST00000553508 KCNA4P22459 653 aa25.51■■□□□ 1.67
PCNX1-205ENST00000553508 DMRT2Q9Y5R5 561 aa25.51■■□□□ 1.67
PCNX1-205ENST00000553508 CNKSR2Q8WXI2 1034 aa25.49■■□□□ 1.67
PCNX1-205ENST00000553508 NCBP3Q53F19 620 aaKnown RBP25.48■■□□□ 1.67
PCNX1-205ENST00000553508 POTEDQ86YR6 584 aa25.28■■□□□ 1.64
PCNX1-205ENST00000553508 NPM3O75607 178 aaKnown RBP25.13■■□□□ 1.61
PCNX1-205ENST00000553508 RNF216Q9NWF9 866 aaPredicted RBP25■■□□□ 1.59
PCNX1-205ENST00000553508 HOXD11P31277 338 aaPredicted RBP24.92■■□□□ 1.58
PCNX1-205ENST00000553508 DCAF8L1A6NGE4 600 aa24.6■■□□□ 1.53
PCNX1-205ENST00000553508 SLC4A1APQ9BWU0 796 aaKnown RBP24.26■■□□□ 1.47
PCNX1-205ENST00000553508 DNAJC5BQ9UF47 199 aa24.21■■□□□ 1.47
PCNX1-205ENST00000553508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.41
PCNX1-205ENST00000553508 SLC4A2P04920 1241 aa23.76■■□□□ 1.39
PCNX1-205ENST00000553508 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
PCNX1-205ENST00000553508 RNF39Q9H2S5 420 aa23.51■■□□□ 1.35
PCNX1-205ENST00000553508 FOXD4L1Q9NU39 408 aa23.46■■□□□ 1.35
PCNX1-205ENST00000553508 ZBTB22O15209 634 aa23.45■■□□□ 1.34
PCNX1-205ENST00000553508 U3KPZ7 1027 aaPredicted RBP23.42■■□□□ 1.34
PCNX1-205ENST00000553508 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
PCNX1-205ENST00000553508 C1QBPQ07021 282 aaKnown RBP23.2■■□□□ 1.3
PCNX1-205ENST00000553508 MYCNP04198 464 aaPredicted RBP23.19■■□□□ 1.3
PCNX1-205ENST00000553508 CACNB1Q02641 598 aaPredicted RBP23.09■■□□□ 1.29
PCNX1-205ENST00000553508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
PCNX1-205ENST00000553508 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
PCNX1-205ENST00000553508 SAMD1Q6SPF0 538 aaPredicted RBP22.94■■□□□ 1.26
PCNX1-205ENST00000553508 SPINK5Q9NQ38 1064 aaPredicted RBP22.85■■□□□ 1.25
PCNX1-205ENST00000553508 APLP2Q06481 763 aa22.8■■□□□ 1.24
PCNX1-205ENST00000553508 CAPN15O75808 1086 aa22.79■■□□□ 1.24
PCNX1-205ENST00000553508 TRHP20396 242 aaPredicted RBP22.68■■□□□ 1.22
PCNX1-205ENST00000553508 ATF5Q9Y2D1 282 aaPredicted RBP22.66■■□□□ 1.22
PCNX1-205ENST00000553508 ATXN8OSP0DMR3 200 aa22.58■■□□□ 1.21
PCNX1-205ENST00000553508 ZNF219Q9P2Y4 722 aaPredicted RBP22.54■■□□□ 1.2
PCNX1-205ENST00000553508 ABCB7O75027 752 aa22.37■■□□□ 1.17
PCNX1-205ENST00000553508 DSG3P32926 999 aa22.35■■□□□ 1.17
PCNX1-205ENST00000553508 POLA2Q14181 598 aa22.23■■□□□ 1.15
PCNX1-205ENST00000553508 ZBTB12Q9Y330 459 aaPredicted RBP21.74■■□□□ 1.07
PCNX1-205ENST00000553508 FBLN2P98095 1184 aa21.68■■□□□ 1.06
PCNX1-205ENST00000553508 MKRN4PQ13434 485 aaPredicted RBP21.63■■□□□ 1.05
PCNX1-205ENST00000553508 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
PCNX1-205ENST00000553508 RBM42Q9BTD8 480 aaKnown RBP21.27■■□□□ 1
PCNX1-205ENST00000553508 SPDYE2BA6NHP3 402 aa21.17■□□□□ 0.98
PCNX1-205ENST00000553508 SPDYE6P0CI01 402 aa21.17■□□□□ 0.98
PCNX1-205ENST00000553508 SPDYE2Q495Y8 402 aa21.17■□□□□ 0.98
PCNX1-205ENST00000553508 ZNF692Q9BU19 519 aaPredicted RBP21.15■□□□□ 0.98
PCNX1-205ENST00000553508 SPDYE4A6NLX3 237 aa21.1■□□□□ 0.97
PCNX1-205ENST00000553508 FKBP8Q14318 412 aa21.04■□□□□ 0.96
PCNX1-205ENST00000553508 AKT1S1Q96B36 256 aa20.99■□□□□ 0.95
PCNX1-205ENST00000553508 SSUH2Q9Y2M2 353 aa20.98■□□□□ 0.95
PCNX1-205ENST00000553508 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
PCNX1-205ENST00000553508 REM2Q8IYK8 340 aaPredicted RBP20.83■□□□□ 0.93
PCNX1-205ENST00000553508 CLEC11AQ9Y240 323 aa20.64■□□□□ 0.89
PCNX1-205ENST00000553508 PITPNM1O00562 1244 aa20.61■□□□□ 0.89
PCNX1-205ENST00000553508 SPDYE1Q8NFV5 336 aaPredicted RBP20.61■□□□□ 0.89
PCNX1-205ENST00000553508 PROM2Q8N271 834 aa20.6■□□□□ 0.89
PCNX1-205ENST00000553508 CHRDL2Q6WN34 429 aa20.49■□□□□ 0.87
PCNX1-205ENST00000553508 STAG3Q9UJ98 1225 aa20.42■□□□□ 0.86
PCNX1-205ENST00000553508 PRR29P0C7W0 189 aa20.37■□□□□ 0.85
PCNX1-205ENST00000553508 FBXO3Q9UK99 471 aa20.24■□□□□ 0.83
PCNX1-205ENST00000553508 PIP4P2Q8N4L2 257 aa20.21■□□□□ 0.83
PCNX1-205ENST00000553508 FXR2P51116 673 aaKnown RBP eCLIP20.19■□□□□ 0.824e-6■■■□□ 17.4
PCNX1-205ENST00000553508 CHADLQ6NUI6 762 aa20.14■□□□□ 0.81
PCNX1-205ENST00000553508 PRKAR2AP13861 404 aaKnown RBP20.11■□□□□ 0.81
PCNX1-205ENST00000553508 MIER1Q8N108 512 aa20.07■□□□□ 0.8
PCNX1-205ENST00000553508 CREBZFQ9NS37 354 aa20.04■□□□□ 0.8
PCNX1-205ENST00000553508 PLCD3Q8N3E9 789 aa20.03■□□□□ 0.8
PCNX1-205ENST00000553508 VASPP50552 380 aaPredicted RBP20■□□□□ 0.79
PCNX1-205ENST00000553508 POTEHQ6S545 545 aa19.99■□□□□ 0.79
PCNX1-205ENST00000553508 PLEKHG5O94827 1062 aa19.92■□□□□ 0.78
PCNX1-205ENST00000553508 FARP1Q9Y4F1 1045 aaPredicted RBP19.85■□□□□ 0.77
PCNX1-205ENST00000553508 MNX1P50219 401 aaPredicted RBP19.79■□□□□ 0.76
PCNX1-205ENST00000553508 KLHL34Q8N239 644 aa19.78■□□□□ 0.76
PCNX1-205ENST00000553508 IFNLR1Q8IU57 520 aaPredicted RBP19.73■□□□□ 0.75
PCNX1-205ENST00000553508 ZBTB47Q9UFB7 747 aaPredicted RBP19.71■□□□□ 0.75
PCNX1-205ENST00000553508 NPM1P06748 294 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCNX1-205ENST00000553508 HAX1O00165 279 aa19.66■□□□□ 0.74
PCNX1-205ENST00000553508 C19orf67A6NJJ6 358 aa19.52■□□□□ 0.72
PCNX1-205ENST00000553508 CD44P16070 742 aaKnown RBP19.52■□□□□ 0.72
PCNX1-205ENST00000553508 SPOCK2Q92563 424 aa19.51■□□□□ 0.71
PCNX1-205ENST00000553508 NUBP1P53384 320 aa19.49■□□□□ 0.71
PCNX1-205ENST00000553508 RASEFQ8IZ41 740 aa19.48■□□□□ 0.71
PCNX1-205ENST00000553508 TSPYL2Q9H2G4 693 aaPredicted RBP19.47■□□□□ 0.71
PCNX1-205ENST00000553508 EVX2Q03828 476 aa19.46■□□□□ 0.71
PCNX1-205ENST00000553508 PAK3O75914 559 aaPredicted RBP19.43■□□□□ 0.7
PCNX1-205ENST00000553508 ZRANB1Q9UGI0 708 aa19.42■□□□□ 0.7
PCNX1-205ENST00000553508 DCAF8Q5TAQ9 597 aa19.39■□□□□ 0.69
PCNX1-205ENST00000553508 FAM212AQ96EL1 285 aa19.35■□□□□ 0.69
PCNX1-205ENST00000553508 CIZ1Q9ULV3 898 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms