RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 GRM1Q13255 1194 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SGCGQ13326 291 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 CCNIQ14094 377 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 HNF4GQ14541 408 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 KCNJ11Q14654 390 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 STARD3Q14849 445 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 RAB39AQ14964 217 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 PLCL1Q15111 1095 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 PRKD1Q15139 912 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 ZMYND11Q15326 602 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SLC18A3Q16572 532 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 OCLNQ16625 522 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 HIST2H2ACQ16777 129 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 PPP1R3AQ16821 1122 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 CLEC16AQ2KHT3 1053 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TMEM44Q2T9K0 475 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SMTNL2Q2TAL5 461 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TUSC1Q2TAM9 212 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 ASTE1Q2TB18 679 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 BTBD16Q32M84 506 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 FAM214AQ32MH5 1076 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 MAJINQ3KP22 176 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TRIM60Q495X7 471 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 LRRC24Q50LG9 513 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 CLLU1Q5K131 121 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 LDLRAP1Q5SW96 308 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 PDZK1Q5T2W1 519 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 RIPPLY2Q5TAB7 128 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 DDI2Q5TDH0 399 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 MROH9Q5TGP6 573 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 RRAGBQ5VZM2 374 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TMEM132EQ6IEE7 984 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 LIN54Q6MZP7 749 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TMEM81Q6P7N7 255 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 C16orf89Q6UX73 402 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SEZ6L2Q6UXD5 910 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 COPS6Q7L5N1 327 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SSX9Q7RTT3 188 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TRIM46Q7Z4K8 759 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 DGKHQ86XP1 1220 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 KRT73Q86Y46 540 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 RAB43Q86YS6 212 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 ZDHHC13Q8IUH4 622 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 EPHX4Q8IUS5 362 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 EID3Q8N140 333 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 CRYBG2Q8N1P7 616 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 DEPDC4Q8N2C3 294 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SFRP1Q8N474 314 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 EIF4E3Q8N5X7 224 aaKnown RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 C2orf69Q8N8R5 385 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 ATG16L2Q8NAA4 619 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 KDF1Q8NAX2 398 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 ZNF527Q8NB42 609 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 FANCBQ8NB91 859 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 CAMKVQ8NCB2 501 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TMEM35BQ8NCS4 154 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 MCPH1Q8NEM0 835 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 GPR156Q8NFN8 814 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 OR5T1Q8NG75 326 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 OR1M1Q8NGA1 313 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 OR6Q1Q8NGQ2 317 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 RNF139Q8WU17 664 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 DEDD2Q8WXF8 326 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 RPL3LQ92901 407 aaKnown RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 KIAA1191Q96A73 305 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TMIGD2Q96BF3 282 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TMCO6Q96DC7 493 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 PGAP3Q96FM1 320 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SUCLG2Q96I99 432 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 FEM1CQ96JP0 617 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 CNOT6LQ96LI5 555 aaKnown RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 FAM227BQ96M60 508 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 RNF145Q96MT1 663 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 QRFPRQ96P65 431 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SLC9A7Q96T83 725 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 FAM118BQ9BPY3 351 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 OCSTAMPQ9BR26 566 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TMEM121Q9BTD3 319 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 PI4K2AQ9BTU6 479 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 NTMT1Q9BV86 223 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 PAPOLGQ9BWT3 736 aaKnown RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TSSK1BQ9BXA7 367 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 TMEM120AQ9BXJ8 343 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SHARPINQ9H0F6 387 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 WNT8AQ9H1J5 351 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SPNS1Q9H2V7 528 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 MMP27Q9H306 513 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 FOXP1Q9H334 677 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 MANSC1Q9H8J5 431 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 SPACA1Q9HBV2 294 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 NCOA5Q9HCD5 579 aaKnown RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 ZNF334Q9HCZ1 680 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 CHMP1AQ9HD42 196 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 BRD7Q9NPI1 651 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 DDX4Q9NQI0 724 aaKnown RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 GSN-AS1Q9NRJ2 163 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 ZNF275Q9NSD4 429 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-218ENST00000541615 ABCC13Q9NSE7 274 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 CATSPERZQ9NTU4 200 aa5.19□□□□□ -1.58
SNHG1-218ENST00000541615 FAM86C1Q9NVL1 165 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms