RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 AGBL3Q8NEM8 1001 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 OR7G3Q8NG95 312 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 CCDC26Q8TAB7 109 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 GRAPLQ8TC17 118 aaPredicted RBP4.4□□□□□ -1.7
PTPN12-206ENST00000435495 ELP5Q8TE02 316 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 LPIN2Q92539 896 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 RSC1A1Q92681 617 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 SLC47A1Q96FL8 570 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 TPD52L3Q96J77 140 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 PHACTR3Q96KR7 559 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 NECTIN4Q96NY8 510 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 NDC1Q9BTX1 674 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 BBS2Q9BXC9 721 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 THAP2Q9H0W7 228 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 SLC25A32Q9H2D1 315 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 EPB41L5Q9HCM4 733 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 TRPC4Q9UBN4 977 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 HMGXB4Q9UGU5 601 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 MKLN1Q9UL63 735 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 U3KQV3 271 aa4.4□□□□□ -1.7
PTPN12-206ENST00000435495 KDM4EB2RXH2 506 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 HRKO00198 91 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ABLIM1O14639 778 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 MEIS2O14770 477 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 PER2O15055 1255 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 SULT1B1O43704 296 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 SCGB2A1O75556 95 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 CBR3O75828 277 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 SEC14L2O76054 403 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 VNN1O95497 513 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 CLPTM1O96005 669 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 SERPINA3P01011 423 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 GBAP04062 536 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 POU2F1P14859 743 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ATF2P15336 505 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 CCND2P30279 289 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 AXLP30530 894 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 CTNNB1P35222 781 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 CAPGP40121 348 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 CDKN1BP46527 198 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 GATMP50440 423 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 SMSP52788 366 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 LILRA4P59901 499 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ST8SIA6P61647 398 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 SPIBQ01892 262 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 SNTB2Q13425 540 aaKnown RBP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 FHL3Q13643 280 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 EPC2Q52LR7 807 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 GPAT3Q53EU6 434 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 TBC1D9BQ66K14 1250 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 PLA2G4FQ68DD2 849 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 TMEM200BQ69YZ2 307 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ATL3Q6DD88 541 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ABLIM2Q6H8Q1 611 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ZC3H14Q6PJT7 736 aaKnown RBP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 MAMDC4Q6UXC1 1216 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 NHLRC1Q6VVB1 395 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ADCK2Q7Z695 626 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 UNC5BQ8IZJ1 945 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 MINDY1Q8N5J2 469 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 DNAAF3Q8N9W5 541 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 CCNYQ8ND76 341 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 STEAP2Q8NFT2 490 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 PSMA8Q8TAA3 256 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ZCCHC10Q8TBK6 192 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 CKAP2Q8WWK9 683 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 KIAA1143Q96AT1 154 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 TMEM186Q96B77 213 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 LRIG1Q96JA1 1093 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 KLHL32Q96NJ5 620 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 OR1F2PQ96R84 312 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 PARK7Q99497 189 aaKnown RBP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 TSGA10Q9BZW7 698 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 KATNBL1Q9H079 304 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 EXO5Q9H790 373 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 NUDT15Q9NV35 164 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 BEX4Q9NWD9 120 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 DNMT3BQ9UBC3 853 aaKnown RBP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 FBXL17Q9UF56 701 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 TRMT6Q9UJA5 497 aaKnown RBP4.4□□□□□ -1.71
PTPN12-206ENST00000435495 GDAQ9Y2T3 454 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 PCDHB7Q9Y5E2 793 aa4.4□□□□□ -1.71
PTPN12-206ENST00000435495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-206ENST00000435495 LOC102723971A0A1B0GUV8 181 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 C2orf92A0A1B0GVN3 265 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 LRRIQ3A6PVS8 624 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-206ENST00000435495 GCOM1H8Y6P7 765 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-206ENST00000435495 CLIC2O15247 247 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 EIF3DO15371 548 aaKnown RBP eCLIP4.39□□□□□ -1.71
PTPN12-206ENST00000435495 TTI1O43156 1089 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 ST8SIA3O43173 380 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 TULP3O75386 442 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 HEXIM1O94992 359 aaKnown RBP4.39□□□□□ -1.71
PTPN12-206ENST00000435495 IGLV1-40P01703 118 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 KRT6BP04259 564 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 ASNSP08243 561 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 FAM86B2P0C5J1 330 aa4.39□□□□□ -1.71
PTPN12-206ENST00000435495 CORO1AP31146 461 aaKnown RBP4.39□□□□□ -1.71
PTPN12-206ENST00000435495 CDKN1AP38936 164 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms