RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PSMC4P43686 418 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZP1P60852 638 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 EGR4Q05215 589 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 NEXNQ0ZGT2 675 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 TBL3Q12788 808 aaKnown RBP3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 IFT88Q13099 833 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 XRCC4Q13426 336 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 BIRC3Q13489 604 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SNX1Q13596 522 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 IL13RA2Q14627 380 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SGSM1Q2NKQ1 1148 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 AP5B1Q2VPB7 878 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ODF3L2Q3SX64 289 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 USH1GQ495M9 461 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 CMPK2Q5EBM0 449 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SPECC1Q5M775 1068 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 WDR78Q5VTH9 848 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SFMBT2Q5VUG0 894 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ATL3Q6DD88 541 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 NADSYN1Q6IA69 706 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ARMCX5Q6P1M9 558 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 GJB7Q6PEY0 223 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 Q6ZTK2 550 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 CACNA2D4Q7Z3S7 1137 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SERPINA11Q86U17 422 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZNF354CQ86Y25 554 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 IQCF2Q8IXL9 164 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 RPAP2Q8IXW5 612 aaPredicted RBP3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 GHDCQ8N2G8 530 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ARHGAP18Q8N392 663 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 HORMAD2Q8N7B1 307 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SMYD1Q8NB12 490 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ERMNQ8TAM6 284 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC12Q8WUD4 166 aaPredicted RBP3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SLC35F5Q8WV83 523 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 OIT3Q8WWZ8 545 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 DHX58Q96C10 678 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 OPTNQ96CV9 577 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 FAM81BQ96LP2 452 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 TTC14Q96N46 770 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 CD180Q99467 661 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 PLEKHA4Q9H4M7 779 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 DCTPP1Q9H773 170 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ANKZF1Q9H8Y5 726 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ENTPD7Q9NQZ7 604 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 GRHL1Q9NZI5 618 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SPATA7Q9P0W8 599 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 ATXN10Q9UBB4 475 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTNNAL1Q9UBT7 734 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 SEL1LQ9UBV2 794 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 WNT16Q9UBV4 365 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 CD207Q9UJ71 328 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 CFAP45Q9UL16 551 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 HPCAL4Q9UM19 191 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 PCDHA7Q9UN72 937 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 PPP2R2CQ9Y2T4 447 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 TMED5Q9Y3A6 229 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 PCDHGB3Q9Y5G1 929 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 PBRM1Q86U86 1689 aa3.48□□□□□ -1.85
SDCBPP3-201ENST00000419629 GRIN2DO15399 1336 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ABCC4O15439 1325 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 HECW2Q9P2P5 1572 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 KDM6AO15550 1401 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 A0A096LPK6 155 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE9A4FU28 777 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 VPS37CA5D8V6 355 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 LRRIQ3A6PVS8 624 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 B9A039 149 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 VWA5AO00534 786 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 GRID2O43424 1007 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 STX10O60499 249 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 PFKFB2O60825 505 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZNF189O75820 626 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ATP6V1G2O95670 118 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 FAM107AO95990 144 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 GSTA2P09210 222 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 TROVE2P10155 538 aaKnown RBP eCLIP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 TOP1P11387 765 aaKnown RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CHRNB2P17787 502 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCT6AP40227 531 aaKnown RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 MTNR1AP48039 350 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 RFX2P48378 723 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 TRPC1P48995 793 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTCFP49711 727 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CDH12P55289 794 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 VSNL1P62760 191 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZBED6P86452 979 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 LTBQ06643 244 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 E2F5Q15329 346 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CAMK4Q16566 473 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 IZUMO4Q1ZYL8 232 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 LACTB2Q53H82 288 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 INO80DQ53TQ3 878 aaPredicted RBP3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ASPHD1Q5U4P2 390 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 DCAF12L2Q5VW00 463 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 ALS2CLQ60I27 953 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CUZD1Q86UP6 607 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 GPSM1Q86YR5 675 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 HERC6Q8IVU3 1022 aa3.47□□□□□ -1.85
SDCBPP3-201ENST00000419629 CADM3Q8N126 398 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms