RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 WDR47O94967 919 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 IVDP26440 423 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 GJA5P36382 358 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 CDH4P55283 916 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 SLC10A2Q12908 348 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 ARMC6Q6NXE6 501 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
NPHP4-203ENST00000378169 DLG3Q92796 817 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 PPM1MQ96MI6 270 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 SYT11Q9BT88 431 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 TLR6Q9Y2C9 796 aa13.18□□□□□ -0.3
NPHP4-203ENST00000378169 HTR7P34969 479 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 ARL4DP49703 201 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 IDH3AP50213 366 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 TRIM32Q13049 653 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 LPIN1Q14693 890 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 VPS26BQ4G0F5 336 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 NAPRTQ6XQN6 538 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 GPRIN1Q7Z2K8 1008 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 GRIP2Q9C0E4 1043 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 PCDH12Q9NPG4 1184 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 ZNF229Q9UJW7 825 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 CCDC162PA2VCL2 907 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 FAM159BA6NKW6 160 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-203ENST00000378169 LAG3P18627 525 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 ITPKAP23677 461 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 CYP4F8P98187 520 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 PATL1Q86TB9 770 aaKnown RBP13.17□□□□□ -0.3
NPHP4-203ENST00000378169 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 BRSK1Q8TDC3 778 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 ING5Q8WYH8 240 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 CD84Q9UIB8 345 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 ANKRD12Q6UB98 2062 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 GLYATL1P3A0A0U1RQE8 302 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 AHSGP02765 367 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
NPHP4-203ENST00000378169 GSTM1P09488 218 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 HSPA7P48741 367 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 PGGT1BP53609 377 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 KIAA0930Q6ICG6 404 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-203ENST00000378169 MAMDC4Q6UXC1 1216 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 DSG4Q86SJ6 1040 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 CHPFQ8IZ52 775 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 TMEM132CQ8N3T6 1108 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 ATG10Q9H0Y0 220 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 OSBPL2Q9H1P3 480 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 CERS4Q9HA82 394 aa13.17□□□□□ -0.3
NPHP4-203ENST00000378169 PAPOLBQ9NRJ5 636 aaKnown RBP13.17□□□□□ -0.3
NPHP4-203ENST00000378169 CAPN8A6NHC0 703 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 SLC7A4O43246 635 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 GPR32O75388 356 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 SIX3O95343 332 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 TNFAIP8O95379 198 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 MT-ND1P03886 318 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 MAPKAPK2P49137 400 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 ACBD5Q5T8D3 534 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 TXNDC8Q6A555 127 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 OOSP2Q86WS3 158 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 RASAL3Q86YV0 1011 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 CDH22Q9UJ99 828 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 ATXN2Q99700 1313 aaKnown RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 SNAP91O60641 907 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 PROZP22891 400 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 CES1P23141 567 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 SLC16A1P53985 500 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 ALDH6A1Q02252 535 aaKnown RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 XKR6Q5GH73 641 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 CAMK1DQ8IU85 385 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 TWIST2Q8WVJ9 160 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 PPP3R2Q96LZ3 170 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 TMCC3Q9ULS5 477 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 SNX6Q9UNH7 406 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 POLR3HQ9Y535 204 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 KCTD3Q9Y597 815 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 BTAF1O14981 1849 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 OR2AG2A6NM03 316 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 ARVCFO00192 962 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 ENPP3O14638 875 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 KCNH1O95259 989 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 C8AP07357 584 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 ELFN1P0C7U0 828 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 SERPINB10P48595 397 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 CSTF3Q12996 717 aaKnown RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 RIPK1Q13546 671 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 TP53BP2Q13625 1128 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 PRKD1Q15139 912 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 METTL21CQ5VZV1 264 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 CRTC3Q6UUV7 619 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 DNAJB7Q7Z6W7 309 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-203ENST00000378169 ZNF276Q8N554 614 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 WASF2Q9Y6W5 498 aa13.16□□□□□ -0.3
NPHP4-203ENST00000378169 PTGESO14684 152 aa13.15□□□□□ -0.3
NPHP4-203ENST00000378169 KDM1AO60341 852 aa13.15□□□□□ -0.3
NPHP4-203ENST00000378169 ACADMP11310 421 aa13.15□□□□□ -0.3
NPHP4-203ENST00000378169 WASP42768 502 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms