RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TOP3AQ13472 1001 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 HIST2H2ACQ16777 129 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 NCBP2-AS2Q69YL0 99 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 HIST2H2AA3Q6FI13 130 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 USP50Q70EL3 339 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 GALNT5Q7Z7M9 940 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 DCBLD1Q8N8Z6 715 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 NTAN1Q96AB6 310 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 TPD52L3Q96J77 140 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 APOL4Q9BPW4 351 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 OPTCQ9UBM4 332 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PHF24Q9UPV7 400 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 CENPXA8MT69 81 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 ENDOD1O94919 500 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 FADS2O95864 444 aaKnown RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 INCA1Q0VD86 236 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 SIM2Q14190 667 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 PTPRNQ16849 979 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 HECTD2Q5U5R9 776 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 TBC1D21Q8IYX1 336 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 FAR1Q8WVX9 515 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 C17orf50Q8WW18 174 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PROX1Q92786 737 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PPM1MQ96MI6 270 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PRDM5Q9NQX1 630 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 ST14Q9Y5Y6 855 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PLCH1Q4KWH8 1693 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 CD3EAPO15446 510 aaKnown RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 NMBRP28336 390 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 S100A3P33764 101 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 COPZ1P61923 177 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PPP1R8Q12972 351 aaKnown RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 HERC3Q15034 1050 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 FAM171A1Q5VUB5 890 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 GPRIN3Q6ZVF9 776 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 GPR142Q7Z601 462 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 CRYBG2Q8N1P7 616 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 TMEM132CQ8N3T6 1108 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 RAB42Q8N4Z0 105 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 SOCS4Q8WXH5 440 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 TMIGD2Q96BF3 282 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 DMRTB1Q96MA1 342 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 FAM126AQ9BYI3 521 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 RASSF1Q9NS23 344 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 ARIH1Q9Y4X5 557 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 COL2A1P02458 1487 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 H0Y858 1186 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 H3BMM5 538 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 WARSP23381 471 aaKnown RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 CLDN10P78369 228 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 MPP1Q00013 466 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 SOWAHAQ2M3V2 549 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 MAP1SQ66K74 1059 aaPredicted RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 MON1AQ86VX9 555 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 SPPL2AQ8TCT8 520 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 CLEC4CQ8WTT0 213 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 BHMTQ93088 406 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 C19orf60Q96EN9 201 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PPP3R2Q96LZ3 170 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 EMILIN2Q9BXX0 1053 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 NFKBIZQ9BYH8 718 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 WDR12Q9GZL7 423 aaKnown RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 DYRK4Q9NR20 520 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 SIX4Q9UIU6 781 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 CNOT6Q9ULM6 557 aaKnown RBP10.88□□□□□ -0.67
RPL28-201ENST00000344063 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.88□□□□□ -0.67
RPL28-201ENST00000344063 ST3GAL5Q9UNP4 418 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 INVSQ9Y283 1065 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PMF1-BGLAPU3KQ54 211 aa10.88□□□□□ -0.67
RPL28-201ENST00000344063 PENKP01210 267 aaPredicted RBP10.87□□□□□ -0.67
RPL28-201ENST00000344063 HALP42357 657 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 MAGEA8P43361 318 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 CDK9P50750 372 aaKnown RBP10.87□□□□□ -0.67
RPL28-201ENST00000344063 DNASE1L3Q13609 305 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 GCNT7Q6ZNI0 430 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 CDH24Q86UP0 819 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 PHC3Q8NDX5 983 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 POP5Q969H6 163 aaKnown RBP10.87□□□□□ -0.67
RPL28-201ENST00000344063 PPP1R14BQ96C90 147 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 SENP6Q9GZR1 1112 aaPredicted RBP10.87□□□□□ -0.67
RPL28-201ENST00000344063 XYLT2Q9H1B5 865 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 MUC13Q9H3R2 512 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 FBXW11Q9UKB1 542 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 ADAMTS7Q9UKP4 1686 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 COL18A1P39060 1754 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 SF3B1O75533 1304 aaKnown RBP eCLIP10.87□□□□□ -0.67
RPL28-201ENST00000344063 PEX10O60683 326 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 SH3BGRLO75368 114 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 MTHFD1P11586 935 aaKnown RBP10.87□□□□□ -0.67
RPL28-201ENST00000344063 RPL26P61254 145 aaKnown RBP10.87□□□□□ -0.67
RPL28-201ENST00000344063 ST8SIA6P61647 398 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 TARBP2Q15633 366 aaKnown RBP10.87□□□□□ -0.67
RPL28-201ENST00000344063 BBS7Q8IWZ6 715 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 OR4L1Q8NH43 312 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 FNDC8Q8TC99 324 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 SLC35F5Q8WV83 523 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 TRIM63Q969Q1 353 aa10.87□□□□□ -0.67
RPL28-201ENST00000344063 MLPHQ9BV36 600 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms