RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SCML4Q8N228 414 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 FIBCD1Q8N539 461 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 USP33Q8TEY7 942 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 EFHD1Q9BUP0 239 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 ANKRD60Q9BZ19 345 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 LIN28AQ9H9Z2 209 aaKnown RBP16.98■□□□□ 0.31
FOXA1-201ENST00000250448 MEAF6Q9HAF1 191 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 CCDC167Q9P0B6 97 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 CD300AQ9UGN4 299 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 MRASO14807 208 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 SCNN1BP51168 640 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 NDST2P52849 883 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 POU6F1Q14863 301 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 HM13Q8TCT9 377 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 TRPC4APQ8TEL6 797 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 DPF3Q92784 378 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 CELF6Q96J87 481 aaKnown RBP16.97■□□□□ 0.31
FOXA1-201ENST00000250448 TBL1YQ9BQ87 522 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 SMOC2Q9H3U7 446 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 FBXO44Q9H4M3 255 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 CCSER2Q9H7U1 834 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 RRN3Q9NYV6 651 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 PTPRSQ13332 1948 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 PLOD2O00469 737 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 PAGE1O75459 146 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 SLC1A2P43004 574 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 TMED1Q13445 227 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 SLC8B1Q6J4K2 584 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 POTEHQ6S545 545 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 KLHDC8BQ8IXV7 354 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 RNF168Q8IYW5 571 aaPredicted RBP16.97■□□□□ 0.31
FOXA1-201ENST00000250448 BIRC8Q96P09 236 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 MCOLN1Q9GZU1 580 aa16.97■□□□□ 0.31
FOXA1-201ENST00000250448 NOL11Q9H8H0 719 aaKnown RBP16.97■□□□□ 0.31
FOXA1-201ENST00000250448 SOD2P04179 222 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 SNRPB2P08579 225 aaKnown RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 ARNTP27540 789 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 PPP1R3AQ16821 1122 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 SAMD4BQ5PRF9 694 aaKnown RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 ESRP1Q6NXG1 681 aaKnown RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 PPHLN1Q8NEY8 458 aaKnown RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 SPATA22Q8NHS9 363 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 MIPOL1Q8TD10 442 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 CYP4F12Q9HCS2 524 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 IL23AQ9NPF7 189 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 HACD3Q9P035 362 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 CROTQ9UKG9 612 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 CHD9Q3L8U1 2897 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 ZNF839A8K0R7 811 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 BMP10O95393 424 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 ARCN1P48444 511 aaKnown RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 FAM45BPQ6NSW5 357 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 ANKFN1Q8N957 763 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 FAM45AQ8TCE6 357 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 ABTB1Q969K4 478 aaPredicted RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 PPWD1Q96BP3 646 aaKnown RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 CLK4Q9HAZ1 481 aaKnown RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 TNFRSF12AQ9NP84 129 aa16.96■□□□□ 0.31
FOXA1-201ENST00000250448 DUS2Q9NX74 493 aaKnown RBP16.96■□□□□ 0.31
FOXA1-201ENST00000250448 SLC38A8A6NNN8 435 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 TIPRLO75663 272 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 EIF4EBP2Q13542 120 aaPredicted RBP16.95■□□□□ 0.3
FOXA1-201ENST00000250448 C10orf120Q5SQS8 335 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 IRAK1BP1Q5VVH5 260 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 LAYNQ6UX15 382 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 ZBTB49Q6ZSB9 765 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 C14orf80Q86SX3 495 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 CUZD1Q86UP6 607 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 SLC25A23Q9BV35 468 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 IGSF5Q9NSI5 407 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 TMEM181Q9P2C4 612 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 SLC8A2Q9UPR5 921 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 GREB1Q4ZG55 1949 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 CKMT2P17540 419 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 TPP2P29144 1249 aaPredicted RBP16.95■□□□□ 0.3
FOXA1-201ENST00000250448 CCR1P32246 355 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 SLC12A2P55011 1212 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 CDH15P55291 814 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 CSHL1Q14406 222 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 TECRLQ5HYJ1 363 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 C7orf61Q8IZ16 206 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 SNX31Q8N9S9 440 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 IPMKQ8NFU5 416 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 FCRL2Q96LA5 508 aaPredicted RBP16.95■□□□□ 0.3
FOXA1-201ENST00000250448 TSGA13Q96PP4 275 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 ZBED2Q9BTP6 218 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 FICDQ9BVA6 458 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 EML4Q9HC35 981 aaKnown RBP16.95■□□□□ 0.3
FOXA1-201ENST00000250448 SPG21Q9NZD8 308 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 SLC2A6Q9UGQ3 507 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 AAR2Q9Y312 384 aaKnown RBP16.95■□□□□ 0.3
FOXA1-201ENST00000250448 HEMK1Q9Y5R4 338 aaPredicted RBP16.95■□□□□ 0.3
FOXA1-201ENST00000250448 CACNG3O60359 315 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 GPC4O75487 556 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 STAMBPO95630 424 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 SLC7A2P52569 658 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 PFKPQ01813 784 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 EML3Q32P44 896 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 NHSL2Q5HYW2 709 aa16.95■□□□□ 0.3
FOXA1-201ENST00000250448 ZNF470Q6ECI4 717 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms