RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Ampd2Q9DBT5 798 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ppp1r2Q9DCL8 206 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cables1Q9ESJ1 568 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Dazap1Q9JII5 406 aaKnown RBP9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Oxct2aQ9JJN4 520 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sertad1Q9JL10 236 aa9.08□□□□□ -0.96
Upf3b-201ENSMUST00000076265 StrcQ8VIM6 1809 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 1700028J19RikA0A0U1RP08 172 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr65A0A1B0GSF4 315 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1160A2AVT0 319 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Catsperg2C6KI89 1145 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zc3h7aE9PWW6 970 aaKnown RBP9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Catsperg1E9Q355 1151 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm8220F6YKI2 213 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 MaptP10637 733 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 PrkcaP20444 672 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 HexaP29416 528 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 ThrbP37242 461 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Igfbp6P47880 238 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Hrh3P58406 445 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sox10Q04888 466 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Agbl1Q09M05 972 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Uap1l1Q3TW96 507 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mier3Q3UHF3 551 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 RasefQ5RI75 627 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zdhhc8Q5Y5T5 762 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sntb2Q61235 520 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ncoa7Q6DFV7 943 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tvp23aQ6NVH0 222 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Snx31Q6P8Y7 439 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mvb12aQ78HU3 271 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fbxo34Q80XI1 695 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rab44Q8CB87 725 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Serpinb13Q8CDC0 389 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Clec4a3Q8JZX6 237 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tesk2Q8VCT9 570 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mrpl9Q99N94 265 aaKnown RBP9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rgs10Q9CQE5 181 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Snw1Q9CSN1 536 aaKnown RBP9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Eid1Q9DCR4 169 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 HikeshiQ9DD02 197 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Vmn1r40Q9EQ46 310 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 LipgQ9WVG5 500 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gria4Q9Z2W8 902 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Golgb1E9PVZ8 3238 aa9.07□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tada2bD3Z4Z0 420 aaKnown RBP9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Morc3F7BJB9 942 aaKnown RBP9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Vmn1r34G3XA52 309 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cldn4O35054 210 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Nipsnap1O55125 284 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ca3P16015 260 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zfp59P16373 634 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ets1P27577 440 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 SstP60041 116 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 AnpepP97449 966 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Calb2Q08331 271 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tex11Q14AT2 947 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sema4cQ64151 834 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1349Q7TQV1 317 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr26Q7TRB7 308 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Paqr8Q80ZE5 354 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Trim65Q8BFW4 522 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rhbdd1Q8BHC7 315 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Chrnb3Q8BMN3 464 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 PxkQ8BX57 582 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Kctd20Q8CDD8 419 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ago3Q8CJF9 860 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Dnm1lQ8K1M6 742 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Plcl2Q8K394 1128 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Golph3lQ8R088 285 aaKnown RBP9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1352Q8VGX5 309 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Arhgef3Q91X46 524 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cnih4Q9CX13 139 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zcchc12Q9CZA5 402 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Stx17Q9D0I4 301 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Slxl1Q9D515 155 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ccdc103Q9D9P2 237 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Prl8a8Q9DAS4 241 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lman2Q9DBH5 358 aaKnown RBP9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 HrgQ9ESB3 525 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 St6galnac6Q9JM95 333 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Flt1P35969 1333 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm17949A0A1B0GRV7 212 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tbc1d16A2ABG4 766 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Armc4B2RY50 1037 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr220E9Q050 325 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm6811E9Q3Y8 510 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fignl2J3QK54 644 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mapkapk5O54992 473 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tlx3O55144 291 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Atp9aO70228 1047 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tnfaip1O70479 316 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 OtcP11725 354 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 GnaqP21279 359 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Chrna7P49582 502 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Pafah1b1P63005 410 aaKnown RBP9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Hnrnph2P70333 449 aaKnown RBP9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Pnpla1Q3V1D5 599 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lyg2Q3V1I0 213 aa9.06□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Armc5Q5EBP3 926 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms