RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CDH4P55283 916 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 NKX3-2P78367 333 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 C18orf21Q32NC0 220 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-209ENST00000547018 GRAMD1BQ3KR37 738 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 PLA2G4EQ3MJ16 856 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 SGO1Q5FBB7 561 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 SLC8B1Q6J4K2 584 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 LYSMD3Q7Z3D4 306 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 IFNEQ86WN2 208 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 CACUL1Q86Y37 369 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 CCDC117Q8IWD4 279 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-209ENST00000547018 GABPB2Q8TAK5 448 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-209ENST00000547018 BRSK1Q8TDC3 778 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 ING5Q8WYH8 240 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 MTG2Q9H4K7 406 aa12.71□□□□□ -0.37
SCAF11-209ENST00000547018 ELAC1Q9H777 363 aaKnown RBP12.71□□□□□ -0.37
SCAF11-209ENST00000547018 GEMIN8Q9NWZ8 242 aaKnown RBP12.71□□□□□ -0.37
SCAF11-209ENST00000547018 A0A1B0GTL3 188 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 DRGXA6NNA5 263 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 NVLO15381 856 aaKnown RBP12.71□□□□□ -0.38
SCAF11-209ENST00000547018 CACNG3O60359 315 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 CXCL14O95715 111 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 LRG1P02750 347 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 FGF1P05230 155 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 CNPP09543 421 aaKnown RBP12.71□□□□□ -0.38
SCAF11-209ENST00000547018 UBTFL6P0CB48 400 aaPredicted RBP12.71□□□□□ -0.38
SCAF11-209ENST00000547018 FOXA1P55317 472 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 ARF5P84085 180 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 RALGDSQ12967 914 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 CYTH1Q15438 398 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 OR4D1Q15615 310 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 LRRC49Q8IUZ0 686 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 CPNE9Q8IYJ1 553 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 NRG4Q8WWG1 115 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 ATP6V1E2Q96A05 226 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 ZDHHC4Q9NPG8 344 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 NMRK1Q9NWW6 199 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 STOML1Q9UBI4 398 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 ANKRD6Q9Y2G4 727 aa12.71□□□□□ -0.38
SCAF11-209ENST00000547018 DOCK4Q8N1I0 1966 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 NLRC5Q86WI3 1866 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 IGLV3-10A0A075B6K4 115 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 PER2O15055 1255 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 RPP40O75818 363 aaKnown RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SYN1P17600 705 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 ITGAXP20702 1163 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CLCN5P51795 746 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CYP2R1Q6VVX0 501 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 DET1Q7L5Y6 550 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 PPFIBP2Q8ND30 876 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 DNAJC9Q8WXX5 260 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 MRPS31Q92665 395 aaKnown RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 ACOX2Q99424 681 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 MAGEH1Q9H213 219 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SPG21Q9NZD8 308 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CD274Q9NZQ7 290 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 GMPR2Q9P2T1 348 aaKnown RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 ZNF212Q9UDV6 495 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CD84Q9UIB8 345 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 VPS51Q9UID3 782 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 ARHGAP26Q9UNA1 814 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 INSL5Q9Y5Q6 135 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 PTPRDP23468 1912 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 MYLKQ15746 1914 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 REV3LO60673 3130 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 A0A088AWK7 358 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 C1orf232A0A0U1RR37 186 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CCDC189A1A4V9 331 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SMIM24O75264 130 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 TM7SF2O76062 418 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CRTAMO95727 393 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SOD2P04179 222 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 HLA-DPA1P20036 260 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CTSOP43234 321 aaPredicted RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 MAPKAPK2P49137 400 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 NTHL1P78549 312 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 MRPS22P82650 360 aaKnown RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 ZNF33AQ06730 810 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 CYLC2Q14093 348 aaPredicted RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SORCS1Q8WY21 1168 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 TUBGCP3Q96CW5 907 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 TSPAN17Q96FV3 270 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 NAF1Q96HR8 494 aaKnown RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SPATA17Q96L03 361 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SLC30A1Q9Y6M5 507 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 BRWD1Q9NSI6 2320 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 KRT87PA6NCN2 255 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 ANKRD66B4E2M5 251 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 SLC7A4O43246 635 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 TBC1D4O60343 1298 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 APOA4P06727 396 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 PRDX3P30048 256 aaKnown RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 MAGEA12P43365 314 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 KPNA1P52294 538 aaPredicted RBP12.7□□□□□ -0.38
SCAF11-209ENST00000547018 RBBP7Q16576 425 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 DNAL1Q4LDG9 190 aa12.7□□□□□ -0.38
SCAF11-209ENST00000547018 TECRLQ5HYJ1 363 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms