RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 CHRM3P20309 590 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 TIAL1Q01085 375 aaKnown RBP eCLIP11.96□□□□□ -0.5
CCDC38-202ENST00000546386 PTPRNQ16849 979 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 C18orf21Q32NC0 220 aaPredicted RBP11.96□□□□□ -0.5
CCDC38-202ENST00000546386 GALNTL6Q49A17 601 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 ZNF648Q5T619 568 aaPredicted RBP11.96□□□□□ -0.5
CCDC38-202ENST00000546386 DPY19L3Q6ZPD9 716 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 CLEC14AQ86T13 490 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 OVCA2Q8WZ82 227 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 ASIC4Q96FT7 647 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 NSUN5Q96P11 429 aaKnown RBP11.96□□□□□ -0.5
CCDC38-202ENST00000546386 GPR78Q96P69 363 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 HBEGFQ99075 208 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 COG4Q9H9E3 785 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.96□□□□□ -0.5
CCDC38-202ENST00000546386 DONSONQ9NYP3 566 aa11.96□□□□□ -0.5
CCDC38-202ENST00000546386 TTC34A8MYJ7 566 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 C9JVG2 144 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 H0Y3Z8 333 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 HLA-EP13747 358 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 ABCE1P61221 599 aaKnown RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 COL9A2Q14055 689 aaPredicted RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 RNF43Q68DV7 783 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 RINLQ6ZS11 566 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 RGS9BPQ6ZS82 235 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 CCDC149Q6ZUS6 474 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 WDR75Q8IWA0 830 aaKnown RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 PHTF2Q8N3S3 785 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 PIWIL2Q8TC59 973 aaKnown RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 FEM1CQ96JP0 617 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 TSNARE1Q96NA8 513 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 CD248Q9HCU0 757 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 IGSF5Q9NSI5 407 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 THAP1Q9NVV9 213 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 WDR70Q9NW82 654 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 GTSE1Q9NYZ3 720 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 L3MBTL1Q9Y468 752 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 CELSR3Q9NYQ7 3312 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 UBXN8O00124 270 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 DCXO43602 365 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 SNNO75324 88 aaPredicted RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 SRP72O76094 671 aaKnown RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 FGF1P05230 155 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 MSX2P35548 267 aaPredicted RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 HNF1BP35680 557 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 ATXN3P54252 364 aaPredicted RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 NME5P56597 212 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 ECT2LQ008S8 904 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 PFKFB4Q16877 469 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 C5orf22Q49AR2 442 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 YTHDF3Q7Z739 585 aaKnown RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 NUDCD1Q96RS6 583 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 GPR21Q99679 349 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 PBX4Q9BYU1 374 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 COMMD8Q9NX08 183 aa11.95□□□□□ -0.5
CCDC38-202ENST00000546386 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.95□□□□□ -0.5
CCDC38-202ENST00000546386 NPIPB15A6NHN6 443 aaPredicted RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 C2orf81A6NN90 581 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 CDC7O00311 574 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 AXIN1O15169 862 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 LINC01565O15544 149 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 TRIM13O60858 407 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 CLASP2O75122 1294 aaKnown RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 NDUFS3O75489 264 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 RPP40O75818 363 aaKnown RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 RHOBTB1O94844 696 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 OLFM2O95897 454 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SERPINE1P05121 402 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 PTPN2P17706 415 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 HLA-DPA1P20036 260 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SERPINB5P36952 375 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 GPM6BQ13491 265 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 NUMA1Q14980 2115 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 E2F5Q15329 346 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 CTC1Q2NKJ3 1217 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 PITRM1Q5JRX3 1037 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 CFAP157Q5JU67 520 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 NCEH1Q6PIU2 408 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SCIMPQ6UWF3 145 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 GET4Q7L5D6 327 aaPredicted RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 ADGRG2Q8IZP9 1017 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 PPM1EQ8WY54 764 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 FUBP1Q96AE4 644 aaKnown RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 TADA1Q96BN2 335 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 GRAMD1AQ96CP6 724 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 MIPEPQ99797 713 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 C2orf49Q9BVC5 232 aaPredicted RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 OXSMQ9NWU1 459 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SUPT7LO94864 414 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 UNC5CO95185 931 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SRCP12931 536 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 ARL1P40616 181 aaPredicted RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SLC6A11P48066 632 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 LEPRP48357 1165 aaKnown RBP11.94□□□□□ -0.5
CCDC38-202ENST00000546386 AGTR2P50052 363 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 IDH3AP50213 366 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 BCL2L1Q07817 233 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 OR4D1Q15615 310 aa11.94□□□□□ -0.5
CCDC38-202ENST00000546386 SH2D4BQ5SQS7 431 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms