RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 AURKAO14965 403 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 MTSS1O43312 755 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 NEBLO76041 1014 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 CLDN7O95471 211 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 SOD1P00441 154 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 FGGP02679 453 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 ELFN1P0C7U0 828 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 PIRTP0C851 137 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 ETS1P14921 441 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 PSMB4P28070 264 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 WNT3AP56704 352 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 CDK18Q07002 472 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 BNIP3Q12983 259 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 FZD2Q14332 565 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 TEAD4Q15561 434 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 SLC14A2Q15849 920 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 DENND2CQ68D51 928 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 DBX2Q6ZNG2 339 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 Q6ZVL8 140 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 KANSL1Q7Z3B3 1105 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 RASGEF1CQ8N431 466 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 DENND6BQ8NEG7 585 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 COG1Q8WTW3 980 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 KLHDC7BQ96G42 594 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 C16orf45Q96MC5 204 aaPredicted RBP13.12□□□□□ -0.31
TPM3-216ENST00000473036 SPATA13Q96N96 652 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 CAMK1GQ96NX5 476 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 WDR24Q96S15 920 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 LYSMD1Q96S90 227 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 VAT1Q99536 393 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 TRHDEQ9UKU6 1024 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 BTBD3Q9Y2F9 522 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 GPSM3Q9Y4H4 160 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 A0A1B0GTQ1 180 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 A6NNZ2 444 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 LZTS3O60299 673 aaPredicted RBP13.11□□□□□ -0.31
TPM3-216ENST00000473036 CEP104O60308 925 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 AGTP01019 485 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 PCCBP05166 539 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 ADRA1AP35348 466 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 STC1P52823 247 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 C21orf59P57076 290 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 RPL26P61254 145 aaKnown RBP13.11□□□□□ -0.31
TPM3-216ENST00000473036 EIF2B5Q13144 721 aaKnown RBP13.11□□□□□ -0.31
TPM3-216ENST00000473036 MSLNQ13421 630 aaPredicted RBP13.11□□□□□ -0.31
TPM3-216ENST00000473036 SNX1Q13596 522 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 INPP5AQ14642 412 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 LRRC14Q15048 493 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 ACOX1Q15067 660 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 ZNF542PQ5EBM4 170 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 SIRPB2Q5JXA9 342 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 PTAR1Q7Z6K3 402 aaPredicted RBP13.11□□□□□ -0.31
TPM3-216ENST00000473036 GLRX5Q86SX6 157 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 PAF1Q8N7H5 531 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 PRELID2Q8N945 189 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 TTC13Q8NBP0 860 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 MAIP1Q8WWC4 291 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 RTP4Q96DX8 246 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 DTD2Q96FN9 168 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 AGAP2Q99490 1192 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 ELF4Q99607 663 aaPredicted RBP13.11□□□□□ -0.31
TPM3-216ENST00000473036 ABCG8Q9H221 673 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 TCEAL2Q9H3H9 227 aaPredicted RBP13.11□□□□□ -0.31
TPM3-216ENST00000473036 TM7SF3Q9NS93 570 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 FAM153AQ9UHL3 310 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 RSPH14Q9UHP6 348 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 CD84Q9UIB8 345 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 RPL26L1Q9UNX3 145 aaKnown RBP13.11□□□□□ -0.31
TPM3-216ENST00000473036 OR1A2Q9Y585 309 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 SAR1BQ9Y6B6 198 aa13.11□□□□□ -0.31
TPM3-216ENST00000473036 SMG1Q96Q15 3661 aaKnown RBP13.1□□□□□ -0.31
TPM3-216ENST00000473036 CELSR3Q9NYQ7 3312 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 SPTY2D1-AS1A0A0U1RR47 76 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 FPGTO14772 594 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 ZNF185O15231 689 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 GCATO75600 419 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 ZNF189O75820 626 aaPredicted RBP13.1□□□□□ -0.31
TPM3-216ENST00000473036 NDST3O95803 873 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 CYP2A6P11509 494 aaPredicted RBP13.1□□□□□ -0.31
TPM3-216ENST00000473036 KCNJ1P48048 391 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 RXRGP48443 463 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 EPHB1P54762 984 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 OVGP1Q12889 678 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
TPM3-216ENST00000473036 FAXCQ5TGI0 409 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 PAPD7Q5XG87 772 aaKnown RBP13.1□□□□□ -0.31
TPM3-216ENST00000473036 KCTD11Q693B1 232 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 DENND5AQ6IQ26 1287 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 IL27RAQ6UWB1 636 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 SYT10Q6XYQ8 523 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 USP45Q70EL2 814 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 GATAD2AQ86YP4 633 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 SLC25A41Q8N5S1 370 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 IPMKQ8NFU5 416 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 SAP25Q8TEE9 199 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 SCAMP4Q969E2 229 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
TPM3-216ENST00000473036 APOOQ9BUR5 198 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms