RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 OCA2Q04671 838 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 BNIP2Q12982 314 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 OLIG2Q13516 323 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 PITRM1Q5JRX3 1037 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 BROXQ5VW32 411 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 LCN8Q6JVE9 175 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 CHST15Q7LFX5 561 aaPredicted RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 ZC3HC1Q86WB0 502 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 SPPL2CQ8IUH8 684 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 SCUBE3Q8IX30 993 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 DDIASQ8IXT1 998 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 AFAP1L2Q8N4X5 818 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 SNX31Q8N9S9 440 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 TRPV3Q8NET8 790 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 PXYLP1Q8TE99 480 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 PTCD2Q8WV60 388 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 HDAC10Q969S8 669 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 MFSD3Q96ES6 412 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 NSMCE3Q96MG7 304 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 CSF3RQ99062 836 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 WDR12Q9GZL7 423 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 RHOJQ9H4E5 214 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 CASS4Q9NQ75 786 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 TRAF6Q9Y4K3 522 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 H0YAE9 185 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 RECQL4O94761 1208 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 AP2A1O95782 977 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 UGT2B4P06133 528 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 HSD17B1P14061 328 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 EEF1DP29692 281 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 RPS9P46781 194 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 PCYT1AP49585 367 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ATP4BP51164 291 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 HNRNPFP52597 415 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 ATXN1P54253 815 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 BST2Q10589 180 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 BFSP2Q13515 415 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 PRMT9Q6P2P2 845 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 SLC27A1Q6PCB7 646 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 PID1Q7Z2X4 250 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 CYP2U1Q7Z449 544 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ACOT1Q86TX2 421 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ADGRG5Q8IZF4 528 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 SLAIN1Q8ND83 568 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 MAGED4Q96JG8 741 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ZFP42Q96MM3 310 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 GPR78Q96P69 363 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 HOPXQ9BPY8 73 aaPredicted RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 KLHL25Q9H0H3 589 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 MRM3Q9HC36 420 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 SACM1LQ9NTJ5 587 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ACTR3BQ9P1U1 418 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ABCD2Q9UBJ2 740 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ACOT9Q9Y305 439 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 MYO18AQ92614 2054 aaKnown RBP11.9□□□□□ -0.5
LTBR-203ENST00000441074 TTC24A2A3L6 582 aaPredicted RBP11.9□□□□□ -0.5
LTBR-203ENST00000441074 CCDC78A2IDD5 438 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 FAM47E-STBD1D6RA91 191 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 NME4O00746 187 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 SEPT4O43236 478 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 TPST1O60507 370 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 KCNH1O95259 989 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 GPIP06744 558 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 SAT1P21673 171 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 RPL34P49207 117 aaKnown RBP11.9□□□□□ -0.5
LTBR-203ENST00000441074 BCAT1P54687 386 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 CBX2Q14781 532 aaPredicted RBP11.9□□□□□ -0.5
LTBR-203ENST00000441074 XAF1Q6GPH4 301 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 LINC00299Q6ZSB3 139 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 CCDC185Q8N715 623 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 DNAAF3Q8N9W5 541 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 BPIFB6Q8NFQ5 453 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 USP33Q8TEY7 942 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 SLC39A3Q9BRY0 314 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 LHPPQ9H008 270 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 TRMT13Q9NUP7 481 aaKnown RBP11.9□□□□□ -0.5
LTBR-203ENST00000441074 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
LTBR-203ENST00000441074 ANKMY1Q9P2S6 941 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 VWA7Q9Y334 891 aa11.9□□□□□ -0.5
LTBR-203ENST00000441074 BBIP1A8MTZ0 92 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 ABCB7O75027 752 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 USP12O75317 370 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 RSL1D1O76021 490 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 INHAP05111 366 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 TGM1P22735 817 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 EEF1B2P24534 225 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 LEPRP48357 1165 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 ARCN1P48444 511 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 POLD2P49005 469 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 NPY2RP49146 381 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 GJA9P57773 515 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 PLCL1Q15111 1095 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 PPP1R3AQ16821 1122 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 PERM1Q5SV97 790 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 NOTUMQ6P988 496 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 BTLAQ7Z6A9 289 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 TFAP2DQ7Z6R9 452 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 PARP8Q8N3A8 854 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 TXNDC5Q8NBS9 432 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms