RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 CFIP05156 583 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 MYBL1P10243 752 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 SRCP12931 536 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 PRKCAP17252 672 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 DESP17661 470 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 ENGP17813 658 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 POU3F2P20265 443 aaPredicted RBP7.05□□□□□ -1.28
HMGN1-205ENST00000419378 GLDCP23378 1020 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 TACR1P25103 407 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 PSMA2P25787 234 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 CASP14P31944 242 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 MAPKAPK2P49137 400 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 AIF1P55008 147 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 IRX4P78413 519 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 GNA12Q03113 381 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 DUOXA1Q1HG43 343 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 ACCSLQ4AC99 568 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 WDR45BQ5MNZ6 344 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 SYCP2LQ5T4T6 812 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 DCAF12L1Q5VU92 463 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 SPECC1LQ69YQ0 1117 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 IL31Q6EBC2 164 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 RETSATQ6NUM9 610 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 SCYL2Q6P3W7 929 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 LINGO4Q6UY18 593 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 USP30Q70CQ3 517 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 UBE2R2Q712K3 238 aaPredicted RBP7.05□□□□□ -1.28
HMGN1-205ENST00000419378 RABEPKQ7Z6M1 372 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 VPS36Q86VN1 386 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 NLRP14Q86W24 1093 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 PYROXD2Q8N2H3 581 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 ZCCHC9Q8N567 271 aaKnown RBP7.05□□□□□ -1.28
HMGN1-205ENST00000419378 LZTR1Q8N653 840 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 ATP11CQ8NB49 1132 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 OR7D4Q8NG98 312 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 CEP76Q8TAP6 659 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 GANCQ8TET4 914 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 FNIP1Q8TF40 1166 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 DNASE2BQ8WZ79 361 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 OR8D1Q8WZ84 308 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 TBC1D31Q96DN5 1066 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGN1-205ENST00000419378 NUSAP1Q9BXS6 441 aaKnown RBP7.05□□□□□ -1.28
HMGN1-205ENST00000419378 TRIM7Q9C029 511 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 BRINP2Q9C0B6 783 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 BTBD1Q9H0C5 482 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 ISCUQ9H1K1 167 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 PCED1AQ9H1Q7 454 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 C6orf106Q9H6K1 298 aaPredicted RBP7.05□□□□□ -1.28
HMGN1-205ENST00000419378 FSCN3Q9NQT6 498 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 TMEM248Q9NWD8 314 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 FBXL12Q9NXK8 326 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 SAMD15Q9P1V8 674 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 ARHGAP20Q9P2F6 1191 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 FBLN5Q9UBX5 448 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 DNAI1Q9UI46 699 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 FZD4Q9ULV1 537 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 FZD10Q9ULW2 581 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 NCKAP1Q9Y2A7 1128 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.05□□□□□ -1.281e-14■■■□□ 15.4
HMGN1-205ENST00000419378 BZW2Q9Y6E2 419 aaKnown RBP7.05□□□□□ -1.28
HMGN1-205ENST00000419378 SCINQ9Y6U3 715 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 CHD5Q8TDI0 1954 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 A0A087X0T9 212 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 C4orf47A7E2U8 309 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 K7ERQ8 282 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 CBX4O00257 560 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 WNT9AO14904 365 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 MCF2LO15068 1137 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ALOX15BO15296 676 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 SMAD6O43541 496 aaKnown RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 CREB3O43889 395 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 RAMP2O60895 175 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 LRCH4O75427 683 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ZMPSTE24O75844 475 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 IL1BP01584 269 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 SERPINF2P08697 491 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 FAM228BP0C875 321 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 GNSP15586 552 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 C5AR1P21730 350 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 EPHB2P29323 1055 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 HNRNPH3P31942 346 aaKnown RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 SLC8A1P32418 973 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 DRD3P35462 400 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ACVRL1P37023 503 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 SERPINH1P50454 418 aaKnown RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 METAP1P53582 386 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 CORO7P57737 925 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ARF5P84085 180 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 SEMA3BQ13214 749 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 TRIM14Q14142 442 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 NR0B2Q15466 257 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 C22orf39Q6P5X5 142 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 CYP4V2Q6ZWL3 525 aaPredicted RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 DSG4Q86SJ6 1040 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 VSTM4Q8IW00 320 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 AADATQ8N5Z0 425 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 ARFGAP1Q8N6T3 406 aa7.04□□□□□ -1.28
HMGN1-205ENST00000419378 RTL3Q8N8U3 475 aaKnown RBP7.04□□□□□ -1.28
HMGN1-205ENST00000419378 OR2A12Q8NGT7 310 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms