RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 HEXAP06865 529 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 THBS1P07996 1170 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 SLC6A3Q01959 620 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 DAZAP2Q15038 168 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 PRRT3Q5FWE3 981 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 SYPL2Q5VXT5 272 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 TEX19Q8NA77 164 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 SCMH1Q96GD3 660 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 ZNF514Q96K75 400 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 MIS12Q9H081 205 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 SMOXQ9NWM0 555 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 KIAA1549Q9HCM3 1950 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CELSR3Q9NYQ7 3312 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 ANKUB1A6NFN9 424 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 VSTM2BA6NLU5 285 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 PYCARD-AS1I3L0S3 204 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CACNB4O00305 520 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 FANCGO15287 622 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 PAGE1O75459 146 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 RELAQ04206 551 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 IFRD2Q12894 506 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 PDCLQ13371 301 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 OCLNQ16625 522 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 SLC9B2Q86UD5 537 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CDH24Q86UP0 819 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 VSIG1Q86XK7 387 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 LRRC49Q8IUZ0 686 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 SHC3Q92529 594 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 ZNF501Q96CX3 271 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 PDXPQ96GD0 296 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CALN1Q9BXU9 219 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 FRMD4BQ9Y2L6 1034 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 NF1P21359 2839 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 HEXIM1O94992 359 aaKnown RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 KRT18P05783 430 aaKnown RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 RHOCP08134 193 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 VIPR1P32241 457 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CSTF2P33240 577 aaKnown RBP eCLIP6.08□□□□□ -1.444e-6■■■□□ 17.2
LMBR1-204ENST00000415428 IRAK1P51617 712 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CDK3Q00526 305 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 ACY1Q03154 408 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 IL10RAQ13651 578 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 PLEKHS1Q5SXH7 462 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 RAP1GAP2Q684P5 730 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CUZD1Q86UP6 607 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 ZNF677Q86XU0 584 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 NAF1Q96HR8 494 aaKnown RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 MGME1Q9BQP7 344 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 NUDT9Q9BW91 350 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 ZNF552Q9H707 407 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 RCOR1Q9UKL0 485 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CIZ1Q9ULV3 898 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-204ENST00000415428 PCDHGB3Q9Y5G1 929 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CLIC4Q9Y696 253 aa6.08□□□□□ -1.44
LMBR1-204ENST00000415428 CPED1A4D0V7 1026 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 EXOC3O60645 756 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 NEBLO76041 1014 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 ATP1A3P13637 1013 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 PRLRP16471 622 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 RENBPP51606 427 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 OR1D5P58170 312 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 CTBSQ01459 385 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 NR6A1Q15406 480 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 SIAH3Q8IW03 269 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 CHERPQ8IWX8 916 aaKnown RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 RTL3Q8N8U3 475 aaKnown RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 SRPK1Q96SB4 655 aaKnown RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 SLC25A23Q9BV35 468 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 NAA15Q9BXJ9 866 aaKnown RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 CARD9Q9H257 536 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 XPO7Q9UIA9 1087 aaKnown RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 LOC102723996A0A087X1L8 192 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 PRICKLE3O43900 615 aaPredicted RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 KLF7O75840 302 aaPredicted RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 SOX30O94993 753 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 IGSF6O95976 241 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 MT-CO1P00395 513 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 MSX1P28360 303 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 TUBB4BP68371 445 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 TUBB2AQ13885 445 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 UGP2Q16851 508 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 DEFB109BQ30KR1 87 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 ALFQ53S48 1182 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 PTRH1Q86Y79 214 aaKnown RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 ZNF366Q8N895 744 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 WDR24Q96S15 920 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 TUBB2BQ9BVA1 445 aa6.07□□□□□ -1.44
LMBR1-204ENST00000415428 MRM3Q9HC36 420 aaKnown RBP6.07□□□□□ -1.44
LMBR1-204ENST00000415428 CPNE3O75131 537 aaKnown RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 HOXD4P09016 255 aaPredicted RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 RFC1P35251 1148 aaPredicted RBP6.06□□□□□ -1.44
LMBR1-204ENST00000415428 DLSTP36957 453 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 CASP4P49662 377 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 PTP4A2Q12974 167 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 CEP135Q66GS9 1140 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 SPOPLQ6IQ16 392 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 CHSY1Q86X52 802 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 ZSWIM9Q86XI8 627 aa6.06□□□□□ -1.44
LMBR1-204ENST00000415428 FAR1Q8WVX9 515 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms