RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 C20orf96Q9NUD7 363 aaPredicted RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 INTS7Q9NVH2 962 aaKnown RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 ASNSD1Q9NWL6 643 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 NPAP1Q9NZP6 1156 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 ZNF98A6NK75 572 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 KLF11O14901 512 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 KCNK2O95069 426 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 BNIP2Q12982 314 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 ZNF786Q8N393 782 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 TMEM102Q8N9M5 508 aaPredicted RBP20.42■□□□□ 0.86
AP1S3-205ENST00000415298 ALKBH8Q96BT7 664 aaKnown RBP20.42■□□□□ 0.86
AP1S3-205ENST00000415298 PIP5K1AQ99755 562 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 MCCC2Q9HCC0 563 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 SLC17A7Q9P2U7 560 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 ANK1P16157 1881 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 PRSS51A0A1B0GVH4 220 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 ISPDA4D126 451 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 E5RJQ4 531 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 TSPAN4O14817 238 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 IMPDH1P20839 514 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 BGNP21810 368 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 AFF1P51825 1210 aaKnown RBP20.42■□□□□ 0.86
AP1S3-205ENST00000415298 DCAF4L1Q3SXM0 396 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 Q3ZCU0 254 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 ARSKQ6UWY0 536 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 SV2AQ7L0J3 742 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 EID3Q8N140 333 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 TMC2Q8TDI7 906 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 PSMC3IPQ9P2W1 217 aaPredicted RBP20.42■□□□□ 0.86
AP1S3-205ENST00000415298 MAN2B2Q9Y2E5 1009 aa20.42■□□□□ 0.86
AP1S3-205ENST00000415298 CALB1P05937 261 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 DHRS4L1P0CG22 281 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 IKBKEQ14164 716 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 WDR44Q5JSH3 913 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 HID1Q8IV36 788 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 LINC01599Q8WXQ3 324 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 PAQR5Q9NXK6 330 aaPredicted RBP20.41■□□□□ 0.86
AP1S3-205ENST00000415298 CITO14578 2027 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 RECQL4O94761 1208 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 NDST3O95803 873 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 TMEM253P0C7T8 217 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 ATF2P15336 505 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 SERPINH1P50454 418 aaKnown RBP20.41■□□□□ 0.86
AP1S3-205ENST00000415298 PTK6Q13882 451 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 MAPK11Q15759 364 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 CLEC16AQ2KHT3 1053 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 GLRA4Q5JXX5 417 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 SLC9A4Q6AI14 798 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 VANGL1Q8TAA9 524 aaPredicted RBP20.41■□□□□ 0.86
AP1S3-205ENST00000415298 VWCEQ96DN2 955 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 RILPQ96NA2 401 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 SP110Q9HB58 689 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 IL37Q9NZH6 218 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 COQ3Q9NZJ6 369 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 MAPRE3Q9UPY8 281 aa20.41■□□□□ 0.86
AP1S3-205ENST00000415298 PRSS44E7EML9 344 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 VNN1O95497 513 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 NFICP08651 508 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 HOXB3P14651 431 aaPredicted RBP20.4■□□□□ 0.86
AP1S3-205ENST00000415298 PCSK2P16519 638 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 ITGA2P17301 1181 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 RPL10P27635 214 aaKnown RBP20.4■□□□□ 0.86
AP1S3-205ENST00000415298 CLDN10P78369 228 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 TOP3AQ13472 1001 aaPredicted RBP20.4■□□□□ 0.86
AP1S3-205ENST00000415298 SIX1Q15475 284 aaPredicted RBP20.4■□□□□ 0.86
AP1S3-205ENST00000415298 BRMS1LQ5PSV4 323 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 PPP1R26Q5T8A7 1209 aaPredicted RBP20.4■□□□□ 0.86
AP1S3-205ENST00000415298 JADE1Q6IE81 842 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 SLC13A5Q86YT5 568 aaPredicted RBP20.4■□□□□ 0.86
AP1S3-205ENST00000415298 MFSD4AQ8N468 514 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 EFCAB3Q8N7B9 438 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 OR13F1Q8NGS4 319 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 TAS1R2Q8TE23 839 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 ASB2Q96Q27 587 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 SERPINI1Q99574 410 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 SLC6A17Q9H1V8 727 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 PLSCR3Q9NRY6 295 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 ACOXLQ9NUZ1 547 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 ZNF3P17036 446 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 GJC1P36383 396 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 TFAMQ00059 246 aaKnown RBP20.4■□□□□ 0.86
AP1S3-205ENST00000415298 BST2Q10589 180 aaKnown RBP20.4■□□□□ 0.86
AP1S3-205ENST00000415298 PPP1R3AQ16821 1122 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 AGAP6Q5VW22 663 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 SYCE2Q6PIF2 218 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 PLEKHM3Q6ZWE6 761 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 ANKS1BQ7Z6G8 1248 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 COLGALT2Q8IYK4 626 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 SEMA4DQ92854 862 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 ZFP42Q96MM3 310 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 AGAP4Q96P64 663 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 COQ10BQ9H8M1 238 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 GPRC5BQ9NZH0 403 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 STRIP2Q9ULQ0 834 aa20.4■□□□□ 0.86
AP1S3-205ENST00000415298 TCRBV7S2A1N4TA0A589 114 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 LEUTXA8MZ59 168 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 FOXN3O00409 490 aaPredicted RBP20.39■□□□□ 0.85
AP1S3-205ENST00000415298 PLOD2O00469 737 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 CTDSP2O14595 271 aa20.39■□□□□ 0.85
AP1S3-205ENST00000415298 TRDMT1O14717 391 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms