RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CES1P23141 567 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 TMED10P49755 219 aaKnown RBP13.99□□□□□ -0.17
APOB-202ENST00000399256 TRIM16LQ309B1 348 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 TMEM53Q6P2H8 277 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 PRMT9Q6P2P2 845 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 BTLAQ7Z6A9 289 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 MIER2Q8N344 545 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 SGCDQ92629 289 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 MUS81Q96NY9 551 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 C1orf50Q9BV19 199 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 USP22Q9UPT9 525 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 AAR2Q9Y312 384 aaKnown RBP13.99□□□□□ -0.17
APOB-202ENST00000399256 DGKBQ9Y6T7 804 aa13.99□□□□□ -0.17
APOB-202ENST00000399256 PLXNA1Q9UIW2 1896 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 HTR3EA5X5Y0 456 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 PIP5K1BO14986 540 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 GRSF1Q12849 480 aaKnown RBP eCLIP13.98□□□□□ -0.172e-25■■■■□ 22.6
APOB-202ENST00000399256 ZNF678Q5SXM1 525 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 CLEC20AQ6ZU45 233 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 LDB1Q86U70 411 aaPredicted RBP13.98□□□□□ -0.17
APOB-202ENST00000399256 COLGALT2Q8IYK4 626 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 MINDY1Q8N5J2 469 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 TMCO5AQ8N6Q1 288 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 NAT16Q8N8M0 369 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 NTAN1Q96AB6 310 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 KCNA7Q96RP8 456 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 CSF3RQ99062 836 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 TKTL2Q9H0I9 626 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 RIC8BQ9NVN3 520 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 DNAJC15Q9Y5T4 150 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 SLC30A1Q9Y6M5 507 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 MYLKQ15746 1914 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 LRRC14BA6NHZ5 514 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 SYNCRIPO60506 623 aaKnown RBP13.98□□□□□ -0.17
APOB-202ENST00000399256 HUS1O60921 280 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 CLPXO76031 633 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 RECQL4O94761 1208 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 CPNE6O95741 557 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 RBP1P09455 135 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 IMPDH1P20839 514 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 SHMT2P34897 504 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 GSK3BP49841 420 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 KPNA1P52294 538 aaPredicted RBP13.98□□□□□ -0.17
APOB-202ENST00000399256 FOXA1P55317 472 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 SH3BP2P78314 561 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 KCNC4Q03721 635 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 PCSK7Q16549 785 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 PYCR3Q53H96 274 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 UNC50Q53HI1 259 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 GPR158Q5T848 1215 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 ZNF773Q6PK81 442 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 PAQR9Q6ZVX9 377 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 SH3RF2Q8TEC5 729 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 TAMM41Q96BW9 452 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 TNIP3Q96KP6 325 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 HEPHQ9BQS7 1158 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 LHPPQ9H008 270 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 PALMDQ9NP74 551 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 DAPK2Q9UIK4 370 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 DERAQ9Y315 318 aa13.98□□□□□ -0.17
APOB-202ENST00000399256 H3BMM5 538 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 PSMD3O43242 534 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 GPIP06744 558 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 USP17L7P0C7H9 530 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 PAMP19021 973 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 AXLP30530 894 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 CASP2P42575 452 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TMBIM6P55061 237 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 SCAPQ12770 1279 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 RPS6KA2Q15349 733 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 DCAF4L1Q3SXM0 396 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ARL13BQ3SXY8 428 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 INTS6LQ5JSJ4 861 aaKnown RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 USP51Q70EK9 711 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 GPRIN1Q7Z2K8 1008 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 SLC22A9Q8IVM8 553 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 RYBPQ8N488 228 aaPredicted RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 DPF3Q92784 378 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 VPS33AQ96AX1 596 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 SLC9A7Q96T83 725 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 SLC30A3Q99726 388 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TUBA1CQ9BQE3 449 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 FSD1LQ9BXM9 530 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ANAPC2Q9UJX6 822 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 BTRCQ9Y297 605 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 MCM3APO60318 1980 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TCRBV5S2A0A599 114 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 LDLRP01130 860 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ALBP02768 609 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 MBL2P11226 248 aaPredicted RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 FCGR1AP12314 374 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 DNAJB2P25686 324 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 HCAR3P49019 387 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ADARB1P78563 741 aaKnown RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 HECTD2Q5U5R9 776 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TMEM214Q6NUQ4 689 aaKnown RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 TMEM207Q6UWW9 146 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 GADL1Q6ZQY3 521 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 PIM3Q86V86 326 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms