RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 LHPPQ9H008 270 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 GNPTGQ9UJJ9 305 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 BTRCQ9Y297 605 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 RAD54BQ9Y620 910 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 A0A0J9YYE9 177 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 M0QYT0 321 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 EEF2KO00418 725 aaKnown RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 AQP9O43315 295 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 H2AFYO75367 372 aaKnown RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 IDO1P14902 403 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 NFKB1P19838 968 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 KCNA5P22460 613 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 BDNFP23560 247 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 NR4A2P43354 598 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 NR2C2P49116 596 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 LILRA4P59901 499 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SLC13A2Q13183 592 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 PCSK7Q16549 785 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 ZNF470Q6ECI4 717 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 LDB1Q86U70 411 aaPredicted RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 DEFB106AQ8N104 65 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SPATA22Q8NHS9 363 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 HEXDCQ8WVB3 486 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SNX19Q92543 992 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 USP22Q9UPT9 525 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 PIN4Q9Y237 131 aaKnown RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 GNGT2O14610 69 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 KRT75O95678 551 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 DLGAP3O95886 979 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 IGHA2P01877 340 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 SLC35E2BP0CK96 405 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 HOXC8P31273 242 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 LRP8Q14114 963 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 OTOP3Q7RTS5 596 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 C14orf80Q86SX3 495 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 ADCK1Q86TW2 530 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 TLK2Q86UE8 772 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 STARD8Q92502 1023 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 NT5C3BQ969T7 300 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 TUBGCP3Q96CW5 907 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 SEPT3Q9UH03 358 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 GIT1Q9Y2X7 761 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 SNX10Q9Y5X0 201 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 SYCE1LA8MT33 242 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 CCL22O00626 93 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 NME4O00746 187 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 PMPCBO75439 489 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 MLNP12872 115 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 HPCAL1P37235 193 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 PSEN2P49810 448 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 APLP1P51693 650 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 TAS2R39P59534 338 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 FKBP1BP68106 108 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 STRADAQ7RTN6 431 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 PSTKQ8IV42 348 aaKnown RBP13.85□□□□□ -0.19
SDC1-202ENST00000381150 ABHD11Q8NFV4 315 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 TMEM74Q96NL1 305 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 TSPAN18Q96SJ8 248 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.85□□□□□ -0.19
SDC1-202ENST00000381150 IPO11Q9UI26 975 aaKnown RBP13.85□□□□□ -0.19
SDC1-202ENST00000381150 IPPQ9Y573 584 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 CPQQ9Y646 472 aa13.85□□□□□ -0.19
SDC1-202ENST00000381150 ZCWPW2A0A1B0GU75 182 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 CLDN25C9JDP6 229 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 AURKAO14965 403 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 BEST1O76090 585 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 APOA4P06727 396 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 SBK3P0C264 359 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 MYF6P23409 242 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 CAPGP40121 348 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 ACADVLP49748 655 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 TNK2Q07912 1038 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 SQLEQ14534 574 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 SPCS2Q15005 226 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 CPSF7Q8N684 471 aaKnown RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 APPL2Q8NEU8 664 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 TRIM15Q9C019 465 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 PRDM16Q9HAZ2 1276 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 VPS28Q9UK41 221 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 SNX5Q9Y5X3 404 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 TCRBV3S1A0A5B6 114 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 PTGESO14684 152 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 SNAP91O60641 907 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 MT-CYBP00156 380 aaPredicted RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 PNPLA4P41247 253 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 MATKP42679 507 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 ACADSBP45954 432 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 TAF6P49848 677 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 IST1P53990 364 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 MAP2K5Q13163 448 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 NFYCQ13952 458 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 INAQ16352 499 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 RETREG3Q86VR2 466 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 RALGPS2Q86X27 583 aaPredicted RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 CENPLQ8N0S6 344 aaPredicted RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 SFRP1Q8N474 314 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 RNF34Q969K3 372 aa13.84□□□□□ -0.19
SDC1-202ENST00000381150 CENPNQ96H22 339 aaPredicted RBP13.84□□□□□ -0.19
SDC1-202ENST00000381150 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms