RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 TRPC5OSA6NMA1 111 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 A8MT66 165 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 G3V2L1 256 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 ALDH1A2O94788 518 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 SNUPNO95149 360 aaKnown RBP13.19□□□□□ -0.3
NCDN-203ENST00000373253 SEMA3BQ13214 749 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 RIPK1Q13546 671 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 STEAP4Q687X5 459 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 LRRC43Q8N309 656 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 FNDC5Q8NAU1 212 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 METTL6Q8TCB7 284 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 SH3RF2Q8TEC5 729 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 NCLNQ969V3 563 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 PTCD3Q96EY7 689 aaKnown RBP13.19□□□□□ -0.3
NCDN-203ENST00000373253 CDKN2AIPNLQ96HQ2 116 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 ADGRE3Q9BY15 652 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 FAM149AA5PLN7 773 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 SYN3O14994 580 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 CSF2RAP15509 400 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 CCNFP41002 786 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 GDF5P43026 501 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 DSG1Q02413 1049 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 MGAT3Q09327 533 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 NR6A1Q15406 480 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 CMTM8Q8IZV2 173 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 SLC22A17Q8WUG5 538 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 APBB2Q92870 758 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 TSPAN18Q96SJ8 248 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 WWOXQ9NZC7 414 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 POMPQ9Y244 141 aa13.19□□□□□ -0.3
NCDN-203ENST00000373253 ARHGAP10A1A4S6 786 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 H3BMM5 538 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 PGM3O95394 542 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 XRCC1P18887 633 aaPredicted RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 NAB1Q13506 487 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 SLC30A9Q6PML9 568 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 RANBP10Q6VN20 620 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 SH2D5Q6ZV89 423 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 MAVSQ7Z434 540 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 WBP2Q969T9 261 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 VPS33AQ96AX1 596 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 FUBP3Q96I24 572 aaKnown RBP eCLIP13.18□□□□□ -0.3
NCDN-203ENST00000373253 MRPL9Q9BYD2 267 aaKnown RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 EBF2Q9HAK2 575 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 MRPL17Q9NRX2 175 aaKnown RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 POLR3BQ9NW08 1133 aaPredicted RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 SPO11Q9Y5K1 396 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 RGSL1A5PLK6 1076 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 TNFRSF10BO14763 440 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 TMCC1O94876 653 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 UGT2B4P06133 528 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 PPARGP37231 505 aaPredicted RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 CSKP41240 450 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 STK19P49842 368 aaPredicted RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 CLCN5P51795 746 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 THOP1P52888 689 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 INSCQ1MX18 579 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 STXBP5Q5T5C0 1151 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 MSANTD2Q6P1R3 559 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 C16orf89Q6UX73 402 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 PIWIL4Q7Z3Z4 852 aaKnown RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 IL12RB2Q99665 862 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 NOL6Q9H6R4 1146 aaKnown RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 DTNAQ9Y4J8 743 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 ANK1P16157 1881 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 ZNF839A8K0R7 811 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 INSIG1O15503 277 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 OAZ2O95190 189 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 SEC24AO95486 1093 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 NDST3O95803 873 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 CYBBP04839 570 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 CNPP09543 421 aaKnown RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 ATF6P18850 670 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 BCL2L1Q07817 233 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 SERINC3Q13530 473 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 DSC3Q14574 896 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 PLA2G4EQ3MJ16 856 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 ANKS6Q68DC2 871 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 ATG14Q6ZNE5 492 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 BHLHA9Q7RTU4 235 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 MFSD6LQ8IWD5 586 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 PGBD5Q8N414 524 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 OR6Y1Q8NGX8 325 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 UPF3AQ9H1J1 476 aaKnown RBP13.18□□□□□ -0.3
NCDN-203ENST00000373253 GALPQ9UBC7 116 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 YIPF1Q9Y548 306 aa13.18□□□□□ -0.3
NCDN-203ENST00000373253 NEDD8-MDP1E9PL57 170 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 F8W8V4 182 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 HOXA2O43364 376 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 SH3BP5O60239 455 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 LPOP22079 712 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 SLC7A2P52569 658 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 HSF5Q4G112 596 aaPredicted RBP13.17□□□□□ -0.3
NCDN-203ENST00000373253 IL27RAQ6UWB1 636 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 LYSMD3Q7Z3D4 306 aa13.17□□□□□ -0.3
NCDN-203ENST00000373253 CILP2Q8IUL8 1156 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms