RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 ARRDC2Q8TBH0 407 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 CD99L2Q8TCZ2 262 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 SKA2Q8WVK7 121 aaPredicted RBP9.71□□□□□ -0.86
MSL3-202ENST00000337339 LPGAT1Q92604 370 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 DPF3Q92784 378 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 GATA6Q92908 595 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 SLC39A13Q96H72 371 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 CDKN2AIPNLQ96HQ2 116 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 C1orf74Q96LT6 269 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 CDK15Q96Q40 435 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 ACOX2Q99424 681 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 PRPF18Q99633 342 aaKnown RBP9.71□□□□□ -0.86
MSL3-202ENST00000337339 AKTIPQ9H8T0 292 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 FAM8A1Q9UBU6 413 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 PRPF19Q9UMS4 504 aaKnown RBP9.71□□□□□ -0.86
MSL3-202ENST00000337339 BPTFQ12830 3046 aa9.71□□□□□ -0.86
MSL3-202ENST00000337339 DICER1Q9UPY3 1922 aaKnown RBP9.71□□□□□ -0.86
MSL3-202ENST00000337339 C2orf81A6NN90 581 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CDC7O00311 574 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 NPHS1O60500 1241 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 SNAP91O60641 907 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 NIPSNAP2O75323 286 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 EOMESO95936 686 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PEX11BO96011 259 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 MMP2P08253 660 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 AGTR2P50052 363 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 IL10RBQ08334 325 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PLD1Q13393 1074 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 ZNF423Q2M1K9 1284 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
MSL3-202ENST00000337339 REP15Q6BDI9 236 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 OR52E8Q6IFG1 317 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 FAM45BPQ6NSW5 357 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 TMCO2Q7Z6W1 182 aaPredicted RBP9.7□□□□□ -0.86
MSL3-202ENST00000337339 FAM45AQ8TCE6 357 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 LINC01599Q8WXQ3 324 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 LRTOMTQ8WZ04 291 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 FUBP3Q96I24 572 aaKnown RBP eCLIP9.7□□□□□ -0.86
MSL3-202ENST00000337339 C8orf48Q96LL4 319 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CIB1Q99828 191 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CENPKQ9BS16 269 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CCDC28BQ9BUN5 200 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 Q9H521 79 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PDP2Q9P2J9 529 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CROTQ9UKG9 612 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PCDHB9Q9Y5E1 797 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 NPEPPSL1A6NEC2 478 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 H3BMM5 538 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CACNG3O60359 315 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 NRP2O60462 931 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CLASP2O75122 1294 aaKnown RBP9.7□□□□□ -0.86
MSL3-202ENST00000337339 RTN3O95197 1032 aaPredicted RBP9.7□□□□□ -0.86
MSL3-202ENST00000337339 MT-ND1P03886 318 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 SLC10A3P09131 477 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 IMPDH1P20839 514 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PRDX6P30041 224 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 MSLNQ13421 630 aaPredicted RBP9.7□□□□□ -0.86
MSL3-202ENST00000337339 OR4D1Q15615 310 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 SGO1Q5FBB7 561 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 RNF219Q5W0B1 726 aaPredicted RBP9.7□□□□□ -0.86
MSL3-202ENST00000337339 NADSYN1Q6IA69 706 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 VPS33AQ96AX1 596 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 KLHL32Q96NJ5 620 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 NOL11Q9H8H0 719 aaKnown RBP9.7□□□□□ -0.86
MSL3-202ENST00000337339 TAS2R13Q9NYV9 303 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 FKBPLQ9UIM3 349 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 VPS28Q9UK41 221 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 SPO11Q9Y5K1 396 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 AP4B1Q9Y6B7 739 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 C15orf38-AP3S2A0A0A6YYH1 394 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 A0A0J9YYE9 177 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 SAC3D1A6NKF1 404 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 H3BNX3 289 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 TIPRLO75663 272 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 RPP40O75818 363 aaKnown RBP9.7□□□□□ -0.86
MSL3-202ENST00000337339 CRTAMO95727 393 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CKMT2P17540 419 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 SLC6A4P31645 630 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 GRB7Q14451 532 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 MAPRE2Q15555 327 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PIGGQ5H8A4 983 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 MTX3Q5HYI7 312 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 LRRC8DQ7L1W4 858 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 ARPINQ7Z6K5 226 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 CLYBLQ8N0X4 340 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 SIDT2Q8NBJ9 832 aaKnown RBP9.7□□□□□ -0.86
MSL3-202ENST00000337339 BRSK1Q8TDC3 778 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 TWIST2Q8WVJ9 160 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 LRCH3Q96II8 777 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 APOL5Q9BWW9 433 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 GPR63Q9BZJ6 419 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 MFSD1Q9H3U5 465 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 SEPT3Q9UH03 358 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 DNMT3LQ9UJW3 386 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PCDHGB4Q9UN71 923 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 AP4S1Q9Y587 144 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PCDHGB5Q9Y5G0 923 aa9.7□□□□□ -0.86
MSL3-202ENST00000337339 PRORSD1PA6NEY8 169 aa9.69□□□□□ -0.86
MSL3-202ENST00000337339 PRRG1O14668 218 aa9.69□□□□□ -0.86
MSL3-202ENST00000337339 AZIN1O14977 448 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms