RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 SYCE1Q8N0S2 351 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 OR8D1Q8WZ84 308 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 ALS2CR12Q96Q35 445 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 WDR24Q96S15 920 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 AGPAT1Q99943 283 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 CAAP1Q9H8G2 361 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 BEX4Q9NWD9 120 aaPredicted RBP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 ITGA11Q9UKX5 1188 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 A0A087X0T9 212 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 RCCD1A6NED2 376 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 PES1O00541 588 aaKnown RBP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 DDX3XO00571 662 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 ARHGEF9O43307 516 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 AKR1B10O60218 316 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 JRKO75564 520 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 ZWINTO95229 277 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 CYP1A2P05177 515 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 PLEKP08567 350 aaPredicted RBP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 FAM228BP0C875 321 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 TRIM49P0CI25 452 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 TRIM49CP0CI26 452 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 BMP7P18075 431 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 LPOP22079 712 aaPredicted RBP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 TAS2R38P59533 333 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 GNG11P61952 73 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 CKAP4Q07065 602 aaKnown RBP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 C1orf61Q13536 156 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 RAPGEF1Q13905 1077 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 KRTAP24-1Q3LI83 254 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 MPP7Q5T2T1 576 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 MEI1Q5TIA1 1274 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 TCERG1LQ5VWI1 586 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 MED25Q71SY5 747 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 ACOT1Q86TX2 421 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 ARHGEF19Q8IW93 802 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 EIF1ADQ8N9N8 165 aaKnown RBP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 C3orf20Q8ND61 904 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 SEMA4DQ92854 862 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 DESI2Q9BSY9 194 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 IKZF4Q9H2S9 585 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 MTG2Q9H4K7 406 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 NEUROD4Q9HD90 331 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 FZD3Q9NPG1 666 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 TRMT1Q9NXH9 659 aaKnown RBP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 LRIT1Q9P2V4 623 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 CHORDC1Q9UHD1 332 aaPredicted RBP6.68□□□□□ -1.34
CSTF3-201ENST00000323959 PKD1L1Q8TDX9 2849 aa6.68□□□□□ -1.34
CSTF3-201ENST00000323959 TRGV8A0A0C4DH27 118 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 TISP43B9A030 160 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 RAF1P04049 648 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 PAEPP09466 180 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 INCA1Q0VD86 236 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 CUL2Q13617 745 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 DUOXA2Q1HG44 320 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 KIAA1328Q86T90 577 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 FAM129CQ86XR2 697 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 KRTAP1-3Q8IUG1 177 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 BCORP1Q8N888 145 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 TMEM102Q8N9M5 508 aaPredicted RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 MSANTD4Q8NCY6 345 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 MCUQ8NE86 351 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 ATL2Q8NHH9 583 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 STAMBPL1Q96FJ0 436 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 BICD1Q96G01 975 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 PCED1BQ96HM7 432 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 WDR77Q9BQA1 342 aaPredicted RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 LACRTQ9GZZ8 138 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 PCIF1Q9H4Z3 704 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 UVRAGQ9P2Y5 699 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 KIAA1257Q9ULG3 409 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 ABCA4P78363 2273 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 TMEM110-MUSTN1A8MSY1 372 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 FOXN3O00409 490 aaPredicted RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 B4GAT1O43505 415 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 ATP8B1O43520 1251 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 ALX3O95076 343 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 HLA-DRAP01903 254 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 KLKB1P03952 638 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 UNGP13051 313 aaPredicted RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 CHRNB2P17787 502 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 CORO1AP31146 461 aaKnown RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 THBS2P35442 1172 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 MATR3P43243 847 aaKnown RBP eCLIP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 GCLMP48507 274 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 RBPJQ06330 500 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 PTP4A2Q12974 167 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 CCDC142Q17RM4 750 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 RPUSD3Q6P087 351 aaKnown RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 ALKBH5Q6P6C2 394 aaKnown RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 FAM180AQ6UWF9 173 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 SLC35F6Q8N357 371 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 RASGEF1CQ8N431 466 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 RCBTB1Q8NDN9 531 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 ZSWIM2Q8NEG5 633 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 PHF10Q8WUB8 498 aaKnown RBP6.67□□□□□ -1.34
CSTF3-201ENST00000323959 NRGNQ92686 78 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 PLD4Q96BZ4 506 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 LMLNQ96KR4 655 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 FAM213AQ9BRX8 229 aa6.67□□□□□ -1.34
CSTF3-201ENST00000323959 XYLT2Q9H1B5 865 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms