RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 ABTB1Q969K4 478 aaPredicted RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 RMDN1Q96DB5 314 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 NSMCE3Q96MG7 304 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 COQ10BQ9H8M1 238 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 FBRSL1Q9HCM7 1045 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 FAM50BQ9Y247 325 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 ZFP37Q9Y6Q3 630 aaPredicted RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 CCDC162PA2VCL2 907 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 C9JVG2 144 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 SDHDO14521 159 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 IPO13O94829 963 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 ATF6P18850 670 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 FAM189BP81408 668 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 GEN1Q17RS7 908 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 B3GNT6Q6ZMB0 384 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 CUZD1Q86UP6 607 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 DIS3LQ8TF46 1054 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 PTERQ96BW5 349 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 CCDC28BQ9BUN5 200 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 POLR1EQ9GZS1 481 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 ARNT2Q9HBZ2 717 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 PRPF19Q9UMS4 504 aaKnown RBP13.14□□□□□ -0.31
CTNS-201ENST00000046640 SH3BP1Q9Y3L3 701 aa13.14□□□□□ -0.31
CTNS-201ENST00000046640 E7ENX8 843 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 UBFD1O14562 309 aaKnown RBP13.13□□□□□ -0.31
CTNS-201ENST00000046640 DENRO43583 198 aaKnown RBP13.13□□□□□ -0.31
CTNS-201ENST00000046640 SGSHP51688 502 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 CDH15P55291 814 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 KLC3Q6P597 504 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 ZNF549Q6P9A3 640 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 LINGO4Q6UY18 593 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 LRRC49Q8IUZ0 686 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 PGAM4Q8N0Y7 254 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 TRIML2Q8N7C3 387 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 OR9I1Q8NGQ6 314 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 CALML6Q8TD86 181 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 SLC45A3Q96JT2 553 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 CASD1Q96PB1 797 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 CIB1Q99828 191 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 MRM3Q9HC36 420 aaKnown RBP13.13□□□□□ -0.31
CTNS-201ENST00000046640 ATP13A1Q9HD20 1204 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 ATXN10Q9UBB4 475 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 C7orf72A4D263 438 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 F5H5T6 163 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 CBX4O00257 560 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 TNFAIP8O95379 198 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 GLP2RO95838 553 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 CDKN1CP49918 316 aaPredicted RBP13.13□□□□□ -0.31
CTNS-201ENST00000046640 CCL23P55773 120 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 GPNMBQ14956 572 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 AGKQ53H12 422 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 ZBTB26Q9HCK0 441 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 BPIFA1Q9NP55 256 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 GALNT8Q9NY28 637 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 PCDHGC4Q9Y5F7 938 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 MIA3Q5JRA6 1907 aa13.13□□□□□ -0.31
CTNS-201ENST00000046640 IGLV3-10A0A075B6K4 115 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 TCAF2A6NFQ2 919 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 MROH6A6NGR9 719 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 NCF1BA6NI72 391 aaPredicted RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 NCF1CA8MVU1 366 aaPredicted RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 SYN3O14994 580 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 CD3EAPO15446 510 aaKnown RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 SEC24DO94855 1032 aaPredicted RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 NCF1P14598 390 aaPredicted RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 OR1D2P34982 312 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 PSME3P61289 254 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 NKX3-2P78367 333 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 NRG1Q02297 640 aaPredicted RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 PIWIL4Q7Z3Z4 852 aaKnown RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 ISCA2Q86U28 154 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 DTNBP1Q96EV8 351 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 NOL11Q9H8H0 719 aaKnown RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 GPR39O43194 453 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 TPST1O60507 370 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 PFDN1O60925 122 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 CKMT2P17540 419 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 PSMC3P17980 439 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 FMO4P31512 558 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 CLCN5P51795 746 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 PRKAA2P54646 552 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 IL10RBQ08334 325 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 GPR17Q13304 367 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 TMED1Q13445 227 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 PFKFB4Q16877 469 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 TMCO2Q7Z6W1 182 aaPredicted RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 DEFB128Q7Z7B8 93 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 SPPL2BQ8TCT7 592 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 NSUN5Q96P11 429 aaKnown RBP13.12□□□□□ -0.31
CTNS-201ENST00000046640 SLC29A1Q99808 456 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 CCT7Q99832 543 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 HSFX1Q9UBD0 423 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms