RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 RUNX2Q13950 521 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 TNIP1Q15025 636 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 HSPB2Q16082 182 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 PRICKLE4Q2TBC4 344 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 FSCBQ5H9T9 825 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 FAM69AQ5T7M9 428 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 INTS11Q5TA45 600 aaKnown RBP3.59□□□□□ -1.83
VMP1-212ENST00000591782 HHATQ5VTY9 493 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 CES5AQ6NT32 575 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 TUBA1AQ71U36 451 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 PATL1Q86TB9 770 aaKnown RBP3.59□□□□□ -1.83
VMP1-212ENST00000591782 TBC1D26Q86UD7 250 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 ERC1Q8IUD2 1116 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 DENND6AQ8IWF6 608 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 KIAA2013Q8IYS2 634 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 PRR26Q8N8Z3 221 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 B4GALNT2Q8NHY0 566 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 CCDC26Q8TAB7 109 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 ERMNQ8TAM6 284 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 SUN5Q8TC36 379 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 BRSK1Q8TDC3 778 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 ACMSDQ8TDX5 336 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 NOC3LQ8WTT2 800 aaKnown RBP3.59□□□□□ -1.83
VMP1-212ENST00000591782 KIF1BPQ96EK5 621 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 DTNBP1Q96EV8 351 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 SEC62Q99442 399 aaKnown RBP3.59□□□□□ -1.83
VMP1-212ENST00000591782 DCLK3Q9C098 648 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 NACA2Q9H009 215 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 SLC25A18Q9H1K4 315 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 CDT1Q9H211 546 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 C20orf141Q9NUB4 165 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 PDRG1Q9NUG6 133 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 ANKRD10Q9NXR5 420 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 IL20Q9NYY1 176 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 CLIC5Q9NZA1 410 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 NDRG3Q9UGV2 375 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 MYO6Q9UM54 1294 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 PCDHA7Q9UN72 937 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 TRIM17Q9Y577 477 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 CYP46A1Q9Y6A2 500 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 CGNL1Q0VF96 1302 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 BRD4O60885 1362 aaPredicted RBP3.59□□□□□ -1.83
VMP1-212ENST00000591782 ROCK1Q13464 1354 aa3.59□□□□□ -1.83
VMP1-212ENST00000591782 ARHGEF11O15085 1522 aa3.59□□□□□ -1.84
VMP1-212ENST00000591782 BICRAQ9NZM4 1560 aa3.59□□□□□ -1.84
VMP1-212ENST00000591782 TEX13CA0A0J9YWL9 993 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 A0A1B0GUA9 196 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 KLRF2D3W0D1 207 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 IFNL4K9M1U5 179 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 VWA5AO00534 786 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 CASQ2O14958 399 aaPredicted RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 LDLRAD4O15165 306 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 ITM2AO43736 263 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 SOX30O94993 753 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 YEATS4O95619 227 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 F9P00740 461 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 VIMP08670 466 aaKnown RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 SNHG28P0DPA3 235 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 TGFB3P10600 412 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 TFPIP10646 304 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 ATP1A3P13637 1013 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 NAGAP17050 411 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 DESP17661 470 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 IL4RP24394 825 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 POU1F1P28069 291 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 HOXD10P28358 340 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 HOXD3P31249 432 aaPredicted RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 ATP6V1E1P36543 226 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 CSE1LP55060 971 aaKnown RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 NANOS2P60321 138 aaKnown RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 Q0VFX4 171 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 G3BP1Q13283 466 aaKnown RBP eCLIP3.58□□□□□ -1.84
VMP1-212ENST00000591782 CTTNQ14247 550 aaKnown RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 PDIA5Q14554 519 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 VEPH1Q14D04 833 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 RCN1Q15293 331 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 SLC9B1Q4ZJI4 515 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 ESCO2Q56NI9 601 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 SPECC1Q5M775 1068 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 PRAMEF19Q5SWL8 479 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 LRRC8EQ6NSJ5 796 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 H1FNTQ75WM6 255 aaPredicted RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 TRILQ7L0X0 811 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 RRM2BQ7LG56 351 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 CCDC186Q7Z3E2 898 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 CEP57Q86XR8 500 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 MB21D2Q8IYB1 491 aaPredicted RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 C9orf106Q8NAJ2 232 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 C11orf65Q8NCR3 313 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 NAXEQ8NCW5 288 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 PPHLN1Q8NEY8 458 aaKnown RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 TCP11Q8WWU5 503 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 ADAMTS14Q8WXS8 1223 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 ARHGEF2Q92974 986 aaKnown RBP3.58□□□□□ -1.84
VMP1-212ENST00000591782 ZUFSPQ96AP4 578 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 MIB2Q96AX9 1013 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 LRRC45Q96CN5 670 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 CFAP36Q96G28 342 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 KLHL15Q96M94 604 aa3.58□□□□□ -1.84
VMP1-212ENST00000591782 CLK4Q9HAZ1 481 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms