RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 ZDHHC20Q5W0Z9 365 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 ALS2CLQ60I27 953 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 Q6ZS52 159 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 LYSMD3Q7Z3D4 306 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 KBTBD6Q86V97 674 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 AADATQ8N5Z0 425 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 OR13J1Q8NGT2 312 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 MFSD3Q96ES6 412 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 SIPA1Q96FS4 1042 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 SGSM3Q96HU1 749 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 PKNOX2Q96KN3 472 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 MRGPRX1Q96LB2 322 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 ZNF778Q96MU6 729 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 SMIM14Q96QK8 99 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 CCDC77Q9BR77 488 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 ACSS3Q9H6R3 686 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 VPS37BQ9H9H4 285 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 PPCSQ9HAB8 311 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 NFKBIL1Q9UBC1 381 aaPredicted RBP12.02□□□□□ -0.49
CCDC57-216ENST00000582885 B4GALT6Q9UBX8 382 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 FZD4Q9ULV1 537 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 SIT1Q9Y3P8 196 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 ARL5AQ9Y689 179 aa12.02□□□□□ -0.49
CCDC57-216ENST00000582885 BPTFQ12830 3046 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 MAP2K7O14733 419 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 STX7O15400 261 aaKnown RBP12.01□□□□□ -0.49
CCDC57-216ENST00000582885 SPINT1O43278 529 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 DCXO43602 365 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 TSPAN6O43657 245 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 TCEA3O75764 348 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 RPP40O75818 363 aaKnown RBP12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CLDN7O95471 211 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 C1QAP02745 245 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 GABRG2P18507 467 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 LHCGRP22888 699 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 ARCN1P48444 511 aaKnown RBP12.01□□□□□ -0.49
CCDC57-216ENST00000582885 STC1P52823 247 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CREB5Q02930 508 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 PTSQ03393 145 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 RALGDSQ12967 914 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 NAB1Q13506 487 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 ARHGEF7Q14155 803 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CNGA3Q16281 694 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 LONRF1Q17RB8 773 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 LRRC66Q68CR7 880 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 PDPK2PQ6A1A2 396 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 ESRP1Q6NXG1 681 aaKnown RBP12.01□□□□□ -0.49
CCDC57-216ENST00000582885 LRIG3Q6UXM1 1119 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 LMNTD2Q8IXW0 634 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CNPY4Q8N129 248 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 HDDC3Q8N4P3 179 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 OR4K2Q8NGD2 314 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 GABPB2Q8TAK5 448 aaPredicted RBP12.01□□□□□ -0.49
CCDC57-216ENST00000582885 DTX3LQ8TDB6 740 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 FBF1Q8TES7 1133 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 SCG3Q8WXD2 468 aaKnown RBP12.01□□□□□ -0.49
CCDC57-216ENST00000582885 EID2BQ96D98 161 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CERS2Q96G23 380 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CDKN2AIPNLQ96HQ2 116 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 NECAB3Q96P71 396 aaPredicted RBP12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CYTH2Q99418 400 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 TRIM56Q9BRZ2 755 aaKnown RBP12.01□□□□□ -0.49
CCDC57-216ENST00000582885 TMEM109Q9BVC6 243 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CDH19Q9H159 772 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 RAD18Q9NS91 495 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 PKP3Q9Y446 797 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 KCTD3Q9Y597 815 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 CACNA1IQ9P0X4 2223 aa12.01□□□□□ -0.49
CCDC57-216ENST00000582885 TCRBV21S2A2A0A5A6 115 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 FAM159BA6NKW6 160 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 IGLV3-19P01714 112 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 NDUFV2P19404 249 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 MGAT5Q09328 741 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 PTPRRQ15256 657 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 KLHL38Q2WGJ6 581 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 POM121L1PQ3SYA9 428 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 UBAP2Q5T6F2 1119 aaKnown RBP12□□□□□ -0.49
CCDC57-216ENST00000582885 AGBL4Q5VU57 503 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 NEK5Q6P3R8 708 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 TRMT10BQ6PF06 316 aaKnown RBP12□□□□□ -0.49
CCDC57-216ENST00000582885 CES3Q6UWW8 571 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 LIPIQ6XZB0 460 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 CROCCP2Q86T23 111 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 TSPAN33Q86UF1 283 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 CNTN4Q8IWV2 1026 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 CDKL2Q92772 493 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 PBXIP1Q96AQ6 731 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 DNAJC1Q96KC8 554 aaKnown RBP12□□□□□ -0.49
CCDC57-216ENST00000582885 PLEKHG4BQ96PX9 1271 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 UHRF1Q96T88 793 aaPredicted RBP12□□□□□ -0.49
CCDC57-216ENST00000582885 OMDQ99983 421 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 ROPN1BQ9BZX4 212 aaPredicted RBP12□□□□□ -0.49
CCDC57-216ENST00000582885 KDM4CQ9H3R0 1056 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 MFSD1Q9H3U5 465 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 ROPN1Q9HAT0 212 aaPredicted RBP12□□□□□ -0.49
CCDC57-216ENST00000582885 ITM2CQ9NQX7 267 aa12□□□□□ -0.49
CCDC57-216ENST00000582885 POLR3BQ9NW08 1133 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms