RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CLTAP09496 248 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 EPB41P11171 864 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 EEF1GP26641 437 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 PPP1R2P41236 205 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 PXNP49023 591 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 FMO5P49326 533 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 UBASH3AP57075 661 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 MYL6P60660 151 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 NCBP1Q09161 790 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 TARDBPQ13148 414 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 MYBPC2Q14324 1141 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 DCAF4L1Q3SXM0 396 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 ZACNQ401N2 412 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CYP4A22Q5TCH4 519 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 Q6ZNX1 250 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 PRIMA1Q86XR5 153 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 VSTM4Q8IW00 320 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 HACE1Q8IYU2 909 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CBARPQ8N350 705 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 FITM2Q8N6M3 262 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 SPC24Q8NBT2 197 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 LEMD2Q8NC56 503 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 HASPINQ8TF76 798 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 JADE3Q92613 823 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 BOD1Q96IK1 185 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 PPP1R10Q96QC0 940 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 NAT10Q9H0A0 1025 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 INTS2Q9H0H0 1204 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 NDST4Q9H3R1 872 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 UNKLQ9H9P5 680 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 RPF1Q9H9Y2 349 aaKnown RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 ACP6Q9NPH0 428 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 TBCCD1Q9NVR7 557 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 VSX1Q9NZR4 365 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 HMGXB4Q9UGU5 601 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 KLK13Q9UKR3 277 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCFD1-204ENST00000463622 CDY1Q9Y6F8 540 aa3.8□□□□□ -1.8
SCFD1-204ENST00000463622 DOCK6Q96HP0 2047 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 IGSF10Q6WRI0 2623 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 H0Y626 953 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 PES1O00541 588 aaKnown RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TRDMT1O14717 391 aaKnown RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 MAPK13O15264 365 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 ATG13O75143 517 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 NDUFS2O75306 463 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 RHOBTB1O94844 696 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 KIF20AO95235 890 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TRIM16O95361 564 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 SERPINC1P01008 464 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 AFPP02771 609 aaKnown RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 GYPCP04921 128 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 THP07101 528 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF37AP17032 561 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 C5AR1P21730 350 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 PON1P27169 355 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 BRCC3P46736 316 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 MXI1P50539 228 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 SNRPFP62306 86 aaKnown RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 IRX4P78413 519 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 SIM1P81133 766 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 MRPS21P82921 87 aaKnown RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TFAMQ00059 246 aaKnown RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 MYL7Q01449 175 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 UBXN1Q04323 297 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TBX2Q13207 712 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 SEMA3BQ13214 749 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 IL10RAQ13651 578 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM196Q5HYL7 178 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF362Q5T0B9 420 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TPGS2Q68CL5 300 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 C19orf48Q6RUI8 117 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 SCARA5Q6ZMJ2 495 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 RRAGAQ7L523 313 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TRAPPC11Q7Z392 1133 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 DNAAF5Q86Y56 855 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 WDR49Q8IV35 697 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 GOLGA5Q8TBA6 731 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 CSGALNACT1Q8TDX6 532 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 CYFIP2Q96F07 1278 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 PDLIM2Q96JY6 352 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TWNKQ96RR1 684 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 AIFM2Q9BRQ8 373 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 ADPGKQ9BRR6 497 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 CCDC94Q9BW85 323 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TLR10Q9BXR5 811 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TRIM5Q9C035 493 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 SMYD3Q9H7B4 428 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 MANSC1Q9H8J5 431 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 KIAA1586Q9HCI6 787 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM9BQ9NQ34 198 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 FAM207AQ9NSI2 230 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 MKS1Q9NXB0 559 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 OBP2AQ9NY56 170 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 CGNQ9P2M7 1197 aaKnown RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 KCNE5Q9UJ90 142 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 FRMD4BQ9Y2L6 1034 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 PDCD11Q14690 1871 aaKnown RBP3.79□□□□□ -1.8
SCFD1-204ENST00000463622 NOTCH4Q99466 2003 aa3.79□□□□□ -1.8
SCFD1-204ENST00000463622 PATJQ8NI35 1801 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms