RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 VPS28Q9UK41 221 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 CORO1CQ9ULV4 474 aaPredicted RBP17.01■□□□□ 0.31
CTSD-204ENST00000433655 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 HOXA2O43364 376 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 PENKP01210 267 aaPredicted RBP17.01■□□□□ 0.31
CTSD-204ENST00000433655 PRLP01236 227 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 OR1D2P34982 312 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 STC1P52823 247 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 LAMB3Q13751 1172 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 PPP1R3AQ16821 1122 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 EML3Q32P44 896 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 MRNIPQ6NTE8 343 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 PGAM4Q8N0Y7 254 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 OR4L1Q8NH43 312 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 CDKN2AIPNLQ96HQ2 116 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 SCLYQ96I15 445 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 FAR2Q96K12 515 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 EXOC2Q96KP1 924 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 ZNF512Q96ME7 567 aaPredicted RBP17.01■□□□□ 0.31
CTSD-204ENST00000433655 EML4Q9HC35 981 aaKnown RBP17.01■□□□□ 0.31
CTSD-204ENST00000433655 MED16Q9Y2X0 877 aa17.01■□□□□ 0.31
CTSD-204ENST00000433655 PLXNA4Q9HCM2 1894 aa17■□□□□ 0.31
CTSD-204ENST00000433655 H3BMM5 538 aa17■□□□□ 0.31
CTSD-204ENST00000433655 STC2O76061 302 aa17■□□□□ 0.31
CTSD-204ENST00000433655 ZNF37AP17032 561 aaPredicted RBP17■□□□□ 0.31
CTSD-204ENST00000433655 TSPAN8P19075 237 aa17■□□□□ 0.31
CTSD-204ENST00000433655 SLC11A2P49281 568 aa17■□□□□ 0.31
CTSD-204ENST00000433655 OXCT1P55809 520 aa17■□□□□ 0.31
CTSD-204ENST00000433655 MRPS35P82673 323 aaKnown RBP17■□□□□ 0.31
CTSD-204ENST00000433655 DSG1Q02413 1049 aa17■□□□□ 0.31
CTSD-204ENST00000433655 CEACAM7Q14002 265 aa17■□□□□ 0.31
CTSD-204ENST00000433655 CYTH1Q15438 398 aa17■□□□□ 0.31
CTSD-204ENST00000433655 OR4D1Q15615 310 aa17■□□□□ 0.31
CTSD-204ENST00000433655 SETMARQ53H47 684 aaPredicted RBP17■□□□□ 0.31
CTSD-204ENST00000433655 KLHDC10Q6PID8 442 aa17■□□□□ 0.31
CTSD-204ENST00000433655 BNC2Q6ZN30 1099 aaPredicted RBP17■□□□□ 0.31
CTSD-204ENST00000433655 GK5Q6ZS86 529 aa17■□□□□ 0.31
CTSD-204ENST00000433655 LRRC43Q8N309 656 aa17■□□□□ 0.31
CTSD-204ENST00000433655 MICAL1Q8TDZ2 1067 aa17■□□□□ 0.31
CTSD-204ENST00000433655 CDRT15Q96T59 188 aa17■□□□□ 0.31
CTSD-204ENST00000433655 AARSD1Q9BTE6 412 aaKnown RBP17■□□□□ 0.31
CTSD-204ENST00000433655 SPON2Q9BUD6 331 aa17■□□□□ 0.31
CTSD-204ENST00000433655 CINPQ9BW66 212 aaPredicted RBP17■□□□□ 0.31
CTSD-204ENST00000433655 RETREG1Q9H6L5 497 aa17■□□□□ 0.31
CTSD-204ENST00000433655 GKN1Q9NS71 199 aa17■□□□□ 0.31
CTSD-204ENST00000433655 NLE1Q9NVX2 485 aaPredicted RBP17■□□□□ 0.31
CTSD-204ENST00000433655 F11P03951 625 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 RAG1P15918 1043 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 XRCC1P18887 633 aaPredicted RBP16.99■□□□□ 0.31
CTSD-204ENST00000433655 PSMA3P25788 255 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 HECTD3Q5T447 861 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 LPCAT4Q643R3 524 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 SLAIN1Q8ND83 568 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 MDGA1Q8NFP4 955 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 OVCA2Q8WZ82 227 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 CEP295NLQ96MC4 621 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 NPAS2Q99743 824 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 WDR41Q9HAD4 459 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 POPDC3Q9HBV1 291 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 STX16-NPEPL1H3BU86 382 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 KIF3CO14782 793 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 INSIG1O15503 277 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 MTHFD2P13995 350 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 CORO1AP31146 461 aaKnown RBP16.99■□□□□ 0.31
CTSD-204ENST00000433655 PKNOX1P55347 436 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 HERVK_113P63132 956 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 PTK2BQ14289 1009 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 RFTN1Q14699 578 aaPredicted RBP16.99■□□□□ 0.31
CTSD-204ENST00000433655 CLEC6AQ6EIG7 209 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 PDZD8Q8NEN9 1154 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 GATA6Q92908 595 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 PLD4Q96BZ4 506 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 TRMOQ9BU70 441 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 ERVK-6Q9BXR3 956 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 TDRD1Q9BXT4 1180 aaKnown RBP16.99■□□□□ 0.31
CTSD-204ENST00000433655 NACA2Q9H009 215 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 RNF38Q9H0F5 515 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 TRAF6Q9Y4K3 522 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 BACE2Q9Y5Z0 518 aa16.99■□□□□ 0.31
CTSD-204ENST00000433655 ILVBLA1L0T0 632 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 DPPA5A6NC42 116 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 CLDN11O75508 207 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 SUPT7LO94864 414 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 CD160O95971 181 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 ENO3P13929 434 aaPredicted RBP16.98■□□□□ 0.31
CTSD-204ENST00000433655 HOXB8P17481 243 aaPredicted RBP16.98■□□□□ 0.31
CTSD-204ENST00000433655 PEX2P28328 305 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 TUFMP49411 452 aaKnown RBP16.98■□□□□ 0.31
CTSD-204ENST00000433655 SCNN1BP51168 640 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 UGT3A2Q3SY77 523 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 SFT2D3Q587I9 215 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 CXorf57Q6NSI4 855 aaKnown RBP16.98■□□□□ 0.31
CTSD-204ENST00000433655 PDSS2Q86YH6 399 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 BBS5Q8N3I7 341 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 LPGAT1Q92604 370 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 USP13Q92995 863 aaPredicted RBP16.98■□□□□ 0.31
CTSD-204ENST00000433655 EXT2Q93063 718 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 ATOH8Q96SQ7 321 aa16.98■□□□□ 0.31
CTSD-204ENST00000433655 CLSTN3Q9BQT9 956 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms