RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 KCNH7Q9NS40 1196 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 STAP1Q9ULZ2 295 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 HACD1B0YJ81 288 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 DFFAO00273 331 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CDC42P60953 191 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 GPR107Q5VW38 600 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ARSKQ6UWY0 536 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC9A9Q8IVB4 645 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 TCTEX1D2Q8WW35 142 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ZCWPW1Q9H0M4 648 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 COPS7BQ9H9Q2 264 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 PCDHB3Q9Y5E6 796 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 E2F8A0AVK6 867 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 H3BNH8 94 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 UBXN8O00124 270 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 RPLP0P05388 317 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SERPINF2P08697 491 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 PSMB9P28065 219 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 RPS9P46781 194 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 EFNA5P52803 228 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 BIKQ13323 160 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 LRRC66Q68CR7 880 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 TIGD3Q6B0B8 471 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 TREML1Q86YW5 311 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 FBXO40Q9UH90 709 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 EIF3LQ9Y262 564 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 DAGLAQ9Y4D2 1042 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CEP290O15078 2479 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC28A2O43868 658 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 KLRC4O43908 158 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 GABBR2O75899 941 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 PROSCO94903 275 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CRTAMO95727 393 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 RRM1P23921 792 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 AGTR1P30556 359 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ETV6P41212 452 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 DGKQP52824 942 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SEMA3AQ14563 771 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 KCTD2Q14681 263 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CLEC16AQ2KHT3 1053 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 AMIGO2Q86SJ2 522 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ADAMTSL2Q86TH1 951 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ASB15Q8WXK1 588 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 PFDN5Q99471 154 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 VAT1Q99536 393 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 GBA3Q9H227 469 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ELOVL6Q9H5J4 265 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 RASSF1Q9NS23 344 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 MCM3APO60318 1980 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 DGKIO75912 1065 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 IMPG1Q17R60 797 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 MIB1Q86YT6 1006 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 SP8Q8IXZ3 490 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 TIGD4Q8IY51 512 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 SEPT12Q8IYM1 358 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 CAMKK1Q8N5S9 505 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 UCMAQ8WVF2 138 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 TMEM143Q96AN5 459 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 IFT43Q96FT9 208 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 GJD4Q96KN9 370 aaPredicted RBP7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 CBWD1Q9BRT8 395 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 VRTNQ9H8Y1 702 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 CLEC11AQ9Y240 323 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 TP53BP1Q12888 1972 aaPredicted RBP7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 APOC4-APOC2K7ER74 178 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 GRAP2O75791 330 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 APOC2P02655 101 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 KLRK1P26718 216 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 CAPZA1P52907 286 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 NIPA1Q7RTP0 329 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 PPHLN1Q8NEY8 458 aaKnown RBP7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 C11orf24Q96F05 449 aaPredicted RBP7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 NMUR2Q9GZQ4 415 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 SH3BP4Q9P0V3 963 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 DOLKQ9UPQ8 538 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 SCN1AP35498 2009 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 FADS2O95864 444 aaKnown RBP7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 BCL2A1Q16548 175 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 BMT2Q1RMZ1 405 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 PID1Q7Z2X4 250 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 LPCAT1Q8NF37 534 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 DNAJC18Q9H819 358 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 CHST10O43529 356 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 HCN1O60741 890 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 TSPAN19P0C672 248 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 BMP2P12643 396 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC6A4P31645 630 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 AADACL2Q6P093 401 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 RNF19BQ6ZMZ0 732 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 FAM35AQ86V20 835 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 RIT2Q99578 217 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 MRPL57Q9BQC6 102 aaKnown RBP7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 TAS2R9Q9NYW1 312 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 STX16-NPEPL1H3BU86 382 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 GRID2O43424 1007 aa7.53□□□□□ -1.2
SYNPO2-202ENST00000429713 BGNP21810 368 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms