RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 FIG4Q92562 907 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 AS3MTQ9HBK9 375 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 MYOZ2Q9NPC6 264 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 TRAF6Q9Y4K3 522 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 LOC100506127A0A0U1RQW1 187 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 PDZK1P1A8MUH7 402 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 SLCO1B7G3V0H7 640 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 FAM72CH0Y354 149 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 SNAP91O60641 907 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 MAFO75444 373 aaPredicted RBP11.72□□□□□ -0.53
DDR1-232ENST00000418800 APOA4P06727 396 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 ZNF286BP0CG31 522 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 YBX3P16989 372 aaKnown RBP eCLIP11.72□□□□□ -0.534e-7■□□□□ 9.7
DDR1-232ENST00000418800 ARF4P18085 180 aaPredicted RBP11.72□□□□□ -0.53
DDR1-232ENST00000418800 NAT1P18440 290 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 OXTRP30559 389 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 PTPN9P43378 593 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 IST1P53990 364 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 RAB10P61026 200 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 NIPAL4Q0D2K0 466 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 TRIM32Q13049 653 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 SPCS2Q15005 226 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 TRIM60Q495X7 471 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 FAM72AQ5TYM5 149 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 FAM72DQ6L9T8 149 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 HMBOX1Q6NT76 420 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 ZYG11AQ6WRX3 759 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 RAB44Q7Z6P3 723 aaPredicted RBP11.72□□□□□ -0.53
DDR1-232ENST00000418800 FAM72BQ86X60 149 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 CEP97Q8IW35 865 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 PPHLN1Q8NEY8 458 aaKnown RBP11.72□□□□□ -0.53
DDR1-232ENST00000418800 SUN5Q8TC36 379 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 PRDM8Q9NQV8 689 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 PDLIM7Q9NR12 457 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 COQ3Q9NZJ6 369 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 AASSQ9UDR5 926 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 CPA4Q9UI42 421 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 GPSM3Q9Y4H4 160 aa11.72□□□□□ -0.53
DDR1-232ENST00000418800 TRIP11Q15643 1979 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 EIF3FO00303 357 aaPredicted RBP11.71□□□□□ -0.53
DDR1-232ENST00000418800 ACOT8O14734 319 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 HS6ST1O60243 411 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 DDNO94850 711 aaPredicted RBP11.71□□□□□ -0.53
DDR1-232ENST00000418800 ATG7O95352 703 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 C1QAP02745 245 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 IFI30P13284 250 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 GGT5P36269 586 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 CAPGP40121 348 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 CLK3P49761 638 aaKnown RBP11.71□□□□□ -0.53
DDR1-232ENST00000418800 C1QTNF8P60827 252 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 MEP1AQ16819 746 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 DALRD3Q5D0E6 543 aaKnown RBP11.71□□□□□ -0.53
DDR1-232ENST00000418800 RBM20Q5T481 1227 aaKnown RBP11.71□□□□□ -0.53
DDR1-232ENST00000418800 NAPEPLDQ6IQ20 393 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 R3HCC1LQ7Z5L2 792 aaKnown RBP11.71□□□□□ -0.53
DDR1-232ENST00000418800 LGI2Q8N0V4 545 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 CNTD1Q8N815 330 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 TERB1Q8NA31 727 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 ZNF555Q8NEP9 628 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 FEM1AQ9BSK4 669 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 ERVK-11Q9UQG0 969 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 PCDHGA7Q9Y5G6 932 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 STYXL1Q9Y6J8 313 aa11.71□□□□□ -0.53
DDR1-232ENST00000418800 ZNFX1Q9P2E3 1918 aaKnown RBP11.71□□□□□ -0.53
DDR1-232ENST00000418800 LRRC14BA6NHZ5 514 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 SDHDO14521 159 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.54
DDR1-232ENST00000418800 B4GALT4O60513 344 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 GSNP06396 782 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 CAPN1P07384 714 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 USP17L7P0C7H9 530 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 PTPN3P26045 913 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 CDH5P33151 784 aaPredicted RBP11.71□□□□□ -0.54
DDR1-232ENST00000418800 TKTL1P51854 596 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 KPNA2P52292 529 aaKnown RBP11.71□□□□□ -0.54
DDR1-232ENST00000418800 CDH17Q12864 832 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 COLEC12Q5KU26 742 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 TAF2Q6P1X5 1199 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 SPESP1Q6UW49 350 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 MILR1Q7Z6M3 343 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 ERO1BQ86YB8 467 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 CMTR2Q8IYT2 770 aaKnown RBP11.71□□□□□ -0.54
DDR1-232ENST00000418800 RORBQ92753 470 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 PPM1MQ96MI6 270 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 KCNA7Q96RP8 456 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 THUMPD3Q9BV44 507 aaKnown RBP11.71□□□□□ -0.54
DDR1-232ENST00000418800 ROGDIQ9GZN7 287 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 ALG2Q9H553 416 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 SETD4Q9NVD3 440 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 ZNHIT2Q9UHR6 403 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 HACL1Q9UJ83 578 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 MYO1GB0I1T2 1018 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 SUPT3HB4E1H0 165 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 PPP6CO00743 305 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 BDNFP23560 247 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 GTF2E2P29084 291 aaKnown RBP11.71□□□□□ -0.54
DDR1-232ENST00000418800 KCNK10P57789 538 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 CCNA1P78396 465 aa11.71□□□□□ -0.54
DDR1-232ENST00000418800 VAC14Q08AM6 782 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms