RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 REEP2Q9BRK0 252 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TTPALQ9BTX7 342 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 EIF2B3Q9NR50 452 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CYB5R1Q9UHQ9 305 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 NCKAP1Q9Y2A7 1128 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 HRH3Q9Y5N1 445 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SCGB2A1O75556 95 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 BTDP43251 543 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TRAM2Q15035 370 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SMG8Q8ND04 991 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ACOT11Q8WXI4 607 aaPredicted RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 FAM129BQ96TA1 746 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 HEMGNQ9BXL5 484 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 FBRSL1Q9HCM7 1045 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 MYO18AQ92614 2054 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ERVV-2B6SEH9 535 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 K7ERQ8 282 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 FANCGO15287 622 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PRKD1Q15139 912 aaPredicted RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 NDUFAF6Q330K2 333 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 HIST2H3PS2Q5TEC6 136 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 NT5DC1Q5TFE4 455 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 OTOAQ7RTW8 1153 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 URGCPQ8TCY9 931 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CPT1BQ92523 772 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 OR51E2Q9H255 320 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SPHK1Q9NYA1 384 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 MGAT4AQ9UM21 535 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 MRPS14O60783 128 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 KCNJ13O60928 360 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 AP2A2O94973 939 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 DCKP27707 260 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 RPL35P42766 123 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SAPCD1Q5SSQ6 148 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 OXR1Q8N573 874 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ELP5Q8TE02 316 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TM9SF3Q9HD45 589 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 LGALS13Q9UHV8 139 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 GGT7Q9UJ14 662 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ASTN2O75129 1339 aaPredicted RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 E9PI62 339 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PROM1O43490 865 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SFTPCP11686 197 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CALCRP30988 508 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 FGL1Q08830 312 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 DYMQ7RTS9 669 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 THAP5Q7Z6K1 395 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 LPCAT1Q8NF37 534 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 RP9Q8TA86 221 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 C9orf72Q96LT7 481 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 NAT9Q9BTE0 207 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ZNF112Q9UJU3 913 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CNOT6Q9ULM6 557 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CDC42BPAQ5VT25 1732 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 MED23Q9ULK4 1368 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ACOD1A6NK06 481 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 UQCRC1P31930 480 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CRATP43155 626 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CRY1Q16526 586 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TBCELQ5QJ74 424 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 FAM198BQ6UWH4 519 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TRMT1LQ7Z2T5 733 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 C11orf49Q9H6J7 331 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 VPS9D1Q9Y2B5 631 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 BAZ2BQ9UIF8 2168 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 C5orf58C9J3I9 102 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 GPRIN2O60269 458 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ATG13O75143 517 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CD63P08962 238 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 LCN1P31025 176 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CTBP2P56545 445 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 HNRNPDQ14103 355 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PPP1R3AQ16821 1122 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 INTS11Q5TA45 600 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 MRPL50Q8N5N7 158 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 SLC39A7Q92504 469 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 KLHL5Q96PQ7 755 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PGAP2Q9UHJ9 254 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 KBTBD13C9JR72 458 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 KDM4BO94953 1096 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ARL4AP40617 200 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 GRIA1P42261 906 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 POLA2Q14181 598 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TSGA10IPQ3SY00 556 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 NIFKQ9BYG3 293 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 ZNF222Q9UK12 451 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CAPNS1P04632 268 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 IGFBP1P08833 259 aaPredicted RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 PTH1RQ03431 593 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CMTR2Q8IYT2 770 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 HDDC3Q8N4P3 179 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 GATA6Q92908 595 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 WDR41Q9HAD4 459 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TNPO3Q9Y5L0 923 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 CSNK1G3Q9Y6M4 447 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 DDX39AO00148 427 aaKnown RBP5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 RAB3BP20337 219 aa5.35□□□□□ -1.55
TNRC6B-202ENST00000335727 TXKP42681 527 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms