RNA–Protein interactions for RNA: ENST00000316124.3

AP003774.1-201, humanhuman

TSL 2 BASIC

Gene AP003774.1, Length 2,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003774.1-201ENST00000316124 MRPS35P82673 323 aaKnown RBP18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 SATB1Q01826 763 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 ART3Q13508 389 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 HERC3Q15034 1050 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 HECTD3Q5T447 861 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 TMEM154Q6P9G4 183 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 C16orf59Q7L2K0 433 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 WBP2Q969T9 261 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 PSKH2Q96QS6 385 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 WDR41Q9HAD4 459 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 MEAF6Q9HAF1 191 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 POLR3BQ9NW08 1133 aaPredicted RBP18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 STK39Q9UEW8 545 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 UBA6A0AVT1 1052 aaPredicted RBP18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 CCDC189A1A4V9 331 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 HOXA2O43364 376 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 KDELR3O43731 214 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 PMLP29590 882 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 CORO1AP31146 461 aaKnown RBP18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 SLC26A3P40879 764 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 CDH13P55290 713 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 CCL23P55773 120 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 MTA1Q13330 715 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 LAMB3Q13751 1172 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 BTG3Q14201 252 aaPredicted RBP18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 UNC50Q53HI1 259 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 SLC8B1Q6J4K2 584 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 SDCCAG8Q86SQ7 713 aaPredicted RBP18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 KBTBD6Q86V97 674 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 PEX13Q92968 403 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 FAR2Q96K12 515 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 CDK5RAP1Q96SZ6 601 aaKnown RBP18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 SERPINI1Q99574 410 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 VN1R3Q9BXE9 311 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 EFCAB1Q9HAE3 211 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 MTRRQ9UBK8 725 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 TRAF6Q9Y4K3 522 aa18.54■□□□□ 0.56
AP003774.1-201ENST00000316124 DPPA5A6NC42 116 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 H3BNX3 289 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 CBX4O00257 560 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 PQBP1O60828 265 aaKnown RBP18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 STC2O76061 302 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 RHOCP08134 193 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 XRCC1P18887 633 aaPredicted RBP18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 STC1P52823 247 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 OR4D1Q15615 310 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 ZNF423Q2M1K9 1284 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 PIGGQ5H8A4 983 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 PGAM4Q8N0Y7 254 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 AFAP1L2Q8N4X5 818 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 SNX31Q8N9S9 440 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 MDGA1Q8NFP4 955 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 OR4K2Q8NGD2 314 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 HMGCLL1Q8TB92 370 aa18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 TMA16Q96EY4 203 aaKnown RBP18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 CORO1CQ9ULV4 474 aaPredicted RBP18.53■□□□□ 0.56
AP003774.1-201ENST00000316124 LRRC14BA6NHZ5 514 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 H3BMM5 538 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 INSIG1O15503 277 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 ZNF37AP17032 561 aaPredicted RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 HMGA1P17096 107 aaKnown RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 TUFMP49411 452 aaKnown RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 ALDH7A1P49419 539 aaKnown RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 CEACAM7Q14002 265 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 USP41Q3LFD5 358 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 CHSY3Q70JA7 882 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 LRRC43Q8N309 656 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 L3HYPDHQ96EM0 354 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 AARSD1Q9BTE6 412 aaKnown RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 ZBED2Q9BTP6 218 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 RNF38Q9H0F5 515 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 NLE1Q9NVX2 485 aaPredicted RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 UBXN8O00124 270 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 SCAMP3O14828 347 aaKnown RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 SMIM24O75264 130 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 SIX3O95343 332 aaPredicted RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 OGNP20774 298 aaKnown RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 ZNF140P52738 457 aaPredicted RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 PDAP1Q13442 181 aaKnown RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 CYTH1Q15438 398 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 DEFB115Q30KQ5 88 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 CAPRIN2Q6IMN6 1127 aaKnown RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 GLT6D1Q7Z4J2 308 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 PTGR2Q8N8N7 351 aaPredicted RBP18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 SCUBE2Q9NQ36 999 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 PCDHGC4Q9Y5F7 938 aa18.52■□□□□ 0.56
AP003774.1-201ENST00000316124 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 ATP6AP2A0A1C7CYW4 349 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 PPP6CO00743 305 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 UBDO15205 165 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 CLDN11O75508 207 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 ATP6AP2O75787 350 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 CRTAMO95727 393 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 PRLP01236 227 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 HDCP19113 662 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 CR2P20023 1033 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 PEX2P28328 305 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 FMO4P31512 558 aa18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 ATXN3P54252 364 aaPredicted RBP18.51■□□□□ 0.55
AP003774.1-201ENST00000316124 GALNT1Q10472 559 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms