RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ARRDC2Q8TBH0 407 aa16.86■□□□□ 0.29
CPSF4-201ENST00000292476 IFT43Q96FT9 208 aa16.86■□□□□ 0.29
CPSF4-201ENST00000292476 SEMA3CQ99985 751 aa16.86■□□□□ 0.29
CPSF4-201ENST00000292476 KIFC1Q9BW19 673 aa16.86■□□□□ 0.29
CPSF4-201ENST00000292476 TMEM216Q9P0N5 145 aa16.86■□□□□ 0.29
CPSF4-201ENST00000292476 SLC17A6Q9P2U8 582 aa16.86■□□□□ 0.29
CPSF4-201ENST00000292476 CHD5Q8TDI0 1954 aa16.86■□□□□ 0.29
CPSF4-201ENST00000292476 C5orf42Q9H799 3197 aa16.86■□□□□ 0.29
CPSF4-201ENST00000292476 PRR5-ARHGAP8B1AHC4 643 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 H0Y3Z8 333 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 ITM2AO43736 263 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 ATP9BO43861 1147 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 PAMP19021 973 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 HLA-DPA1P20036 260 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 ALDH18A1P54886 795 aaKnown RBP16.85■□□□□ 0.29
CPSF4-201ENST00000292476 MAXP61244 160 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 ARHGAP8P85298 464 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 DSC2Q02487 901 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 USP4Q13107 963 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 ZNF77Q15935 545 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 ANKRD54Q6NXT1 300 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 TMEM184AQ6ZMB5 413 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 FEM1CQ96JP0 617 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 NECAB3Q96P71 396 aaPredicted RBP16.85■□□□□ 0.29
CPSF4-201ENST00000292476 EBF4Q9BQW3 602 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 OR51B4Q9Y5P0 310 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 HEATR9A2RTY3 570 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 GRXCR2A6NFK2 248 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 KRT36O76013 467 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 KCNA4P22459 653 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 CSKP41240 450 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 CSRP3P50461 194 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 ACTR3P61158 418 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 NTHL1P78549 312 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 MRPS35P82673 323 aaKnown RBP16.85■□□□□ 0.29
CPSF4-201ENST00000292476 RCN2Q14257 317 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 PCSK7Q16549 785 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 MUM1Q2TAK8 710 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 FSCBQ5H9T9 825 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 CERCAMQ5T4B2 595 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 METTL21CQ5VZV1 264 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 PDPK2PQ6A1A2 396 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 FSTL4Q6MZW2 842 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 PKN3Q6P5Z2 889 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 LRRC74BQ6ZQY2 392 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 TPGS1Q6ZTW0 290 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 KCNMB4Q86W47 210 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 ULK2Q8IYT8 1036 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 PGBD5Q8N414 524 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 C12orf76Q8N812 135 aaPredicted RBP16.85■□□□□ 0.29
CPSF4-201ENST00000292476 PPFIBP2Q8ND30 876 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 WDR60Q8WVS4 1066 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 RANBP9Q96S59 729 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 APOL2Q9BQE5 337 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 SLC2A11Q9BYW1 496 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 SMG9Q9H0W8 520 aaKnown RBP16.85■□□□□ 0.29
CPSF4-201ENST00000292476 SCUBE2Q9NQ36 999 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 CORO1CQ9ULV4 474 aaPredicted RBP16.85■□□□□ 0.29
CPSF4-201ENST00000292476 CCL26Q9Y258 94 aa16.85■□□□□ 0.29
CPSF4-201ENST00000292476 HELZP42694 1942 aaKnown RBP16.84■□□□□ 0.29
CPSF4-201ENST00000292476 LOC285095A0A1B0GVY8 99 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 ZNF195O14628 629 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 INSIG1O15503 277 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 MBTPS2O43462 519 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 ZMPSTE24O75844 475 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 PENKP01210 267 aaPredicted RBP16.84■□□□□ 0.29
CPSF4-201ENST00000292476 FGF1P05230 155 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 MMP2P08253 660 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 CEBPBP17676 345 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 MZF1P28698 734 aaPredicted RBP16.84■□□□□ 0.29
CPSF4-201ENST00000292476 CPOXP36551 454 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 MAPK8P45983 427 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 IDH3AP50213 366 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 SERPINH1P50454 418 aaKnown RBP16.84■□□□□ 0.29
CPSF4-201ENST00000292476 IRX4P78413 519 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 DMC1Q14565 340 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 DENND5AQ6IQ26 1287 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 SYCE2Q6PIF2 218 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 TMC5Q6UXY8 1006 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 MYLK4Q86YV6 388 aaPredicted RBP16.84■□□□□ 0.29
CPSF4-201ENST00000292476 SMRP1Q8NCR6 262 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 IRF7Q92985 503 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 CMTM5Q96DZ9 223 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 GPR22Q99680 433 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 PIH1D1Q9NWS0 290 aaKnown RBP16.84■□□□□ 0.29
CPSF4-201ENST00000292476 NMRK1Q9NWW6 199 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 CDH22Q9UJ99 828 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 LRCH1Q9Y2L9 728 aa16.84■□□□□ 0.29
CPSF4-201ENST00000292476 A0A096LPK6 155 aa16.83■□□□□ 0.28
CPSF4-201ENST00000292476 NRG2O14511 850 aaPredicted RBP16.83■□□□□ 0.28
CPSF4-201ENST00000292476 SCAMP3O14828 347 aaKnown RBP16.83■□□□□ 0.28
CPSF4-201ENST00000292476 SIN3BO75182 1162 aa16.83■□□□□ 0.28
CPSF4-201ENST00000292476 FKBP6O75344 327 aa16.83■□□□□ 0.28
CPSF4-201ENST00000292476 LYPLA1O75608 230 aaPredicted RBP16.83■□□□□ 0.28
CPSF4-201ENST00000292476 SMNDC1O75940 238 aaKnown RBP eCLIP16.83■□□□□ 0.281e-8■■■■■ 30.2
CPSF4-201ENST00000292476 COL6A2P12110 1019 aa16.83■□□□□ 0.28
CPSF4-201ENST00000292476 COPAP53621 1224 aa16.83■□□□□ 0.28
CPSF4-201ENST00000292476 ARF5P84085 180 aa16.83■□□□□ 0.28
CPSF4-201ENST00000292476 KDSRQ06136 332 aa16.83■□□□□ 0.28
CPSF4-201ENST00000292476 SULT2A1Q06520 285 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms