RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 H2al1oL7MU04 110 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Hdac3O88895 424 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Vti1aO89116 217 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Acvr2aP27038 513 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Slc1a2P43006 572 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Rpl9P51410 192 aaKnown RBP9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Stmn1P54227 149 aaKnown RBP9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gnb5P62881 395 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Grin2cQ01098 1239 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Grb7Q03160 535 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 OsbpQ3B7Z2 805 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 SctrQ5FWI2 447 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ntan1Q64311 310 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Klhl26Q8BGY4 606 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 LsampQ8BLK3 341 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Tor1aip2Q8BYU6 502 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Fam46bQ8C152 427 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 AA792892Q8C6S1 278 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Stx5Q8K1E0 355 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Txndc11Q8K2W3 948 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Olfr1090Q8VGA6 313 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cdkal1Q91WE6 578 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ints11Q9CWS4 600 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Dimt1Q9D0D4 313 aaKnown RBP9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Fam162aQ9D6U8 155 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gtf2e2Q9D902 292 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Tlr5Q9JLF7 859 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cpne6Q9Z140 557 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Slc6a21A0A1B0GSD2 748 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Itga8A2ARA8 1062 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gm14744B1AVU4 173 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gm1330D3Z460 184 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Kctd18E0CZ26 429 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Vmn2r5K7N788 911 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Fgf15O35622 218 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Pou3f2P31360 445 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 AcadvlP50544 656 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Nkx3-2P97503 333 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cpa6Q5U901 438 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Traf4Q61382 470 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Sohlh1Q6IUP1 357 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gal3st2Q6XQH0 394 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 ZfatQ7TS63 1237 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Tmem198Q8BG75 360 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Trim23Q8BGX0 574 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ckap4Q8BMK4 575 aaKnown RBP9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Tprg1Q8CB49 279 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Reep2Q8VCD6 254 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Pcdhgb2Q91XX7 928 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 DarsQ922B2 501 aaKnown RBP9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Serpinb3bQ9D1Q5 387 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 5430402E10RikQ9D3N5 173 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cyp4v2Q9DBW0 525 aa9.75□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 C87977A2A958 498 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gm2237E9Q501 211 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Gm3591K7N6X2 186 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Klc2O88448 599 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cops6O88545 324 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 F10O88947 481 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cers1P27545 350 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 PrkcbP68404 671 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 SiaeP70665 541 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 GabpaQ00422 454 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 BcheQ03311 603 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 RnaselQ05921 735 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Otud5Q3U2S4 566 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Q3U7U4 132 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Prom2Q3UUY6 835 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Sfi1Q3UZY0 1216 aaKnown RBP9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Myo1gQ5SUA5 1024 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 FcgrtQ61559 365 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Dpp10Q6NXK7 797 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Alkal2Q80UG6 151 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Kctd6Q8BNL5 237 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Rap2cQ8BU31 183 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Dpp9Q8BVG4 862 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Nipal4Q8BZF2 406 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Epc2Q8C0I4 808 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Pphln1Q8K2H1 381 aaKnown RBP9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Vmn1r198Q8R263 300 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Olfr575Q8VH16 318 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ndufv1Q91YT0 464 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cts3Q91ZD5 332 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 DhddsQ99KU1 333 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Metap1dQ9CPW9 335 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 BambiQ9D0L6 260 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 CsadQ9DBE0 493 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 MecrQ9DCS3 373 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Cyhr1Q9QXA1 311 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Eya4Q9Z191 616 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Mbd1Q9Z2E2 636 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Ssc5dQ8BV57 1371 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Slc25a54B1AUS6 473 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Plekha5E9Q6H8 1269 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 LtfP08071 707 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 MaptP10637 733 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 TP20293 436 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Nfkb1P25799 971 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Asgr1P34927 284 aa9.74□□□□□ -0.85
Hmgb1-201ENSMUST00000085546 Atp6v1e1P50518 226 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms