RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Atad3Q925I1 591 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 TMEM121BQ99MX7 572 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Mki67E9PVX6 3177 aaKnown RBP22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 OtofQ9ESF1 1997 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Olfr742A2RTP5 311 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 mt-Co3P00416 261 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Hcls1P49710 486 aaKnown RBP22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Myl2P51667 166 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Togaram2Q3TYG6 1002 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Nxpe4Q52KP5 543 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Dyrk2Q5U4C9 599 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Mtnr1aQ61184 353 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 ThrspQ62264 150 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Mea1Q64327 174 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Hs3st2Q673U1 367 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Them6Q80ZW2 207 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Cgrrf1Q8BMJ7 332 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Impg1Q8R1W8 798 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 XpotQ9CRT8 963 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Riok3Q9DBU3 519 aaKnown RBP22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Pi16Q9ET66 489 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Hes6Q9JHE6 224 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Atp6v1c1Q9Z1G3 382 aa22.94■■□□□ 1.26
Upf3a-201ENSMUST00000043767 B020011L13RikA0A087WQI7 412 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Gm13101A2ASJ0 481 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ccdc149F6V035 524 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ctla2bP12400 113 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Dsc3P55850 896 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 St14P56677 855 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ythdf1P59326 559 aaKnown RBP22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Zbtb16Q3UQ17 673 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Arl5aQ80ZU0 179 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Arhgap25Q8BYW1 648 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Trip10Q8CJ53 603 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Slc30a5Q8R4H9 761 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Pglyrp2Q8VCS0 530 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Pcdha6Q91Y14 946 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ubox5Q925F4 539 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ptdss1Q99LH2 473 aaKnown RBP22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 4930524N10RikQ9D519 233 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Mrps9Q9D7N3 390 aaKnown RBP22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Lilra5D3Z7A9 295 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 PbsnO08976 174 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ccl4P14097 92 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Bcl6P41183 707 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ccng1P51945 294 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Dsc1P55849 886 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 DselQ0VBN2 1207 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Tmem184cQ3TPR7 525 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 LchnQ3UHG7 455 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Htr1aQ64264 421 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Exoc3l4Q6DIA2 721 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Nup93Q8BJ71 819 aaKnown RBP22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Camk1dQ8BW96 385 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ccdc187Q8C5V8 958 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Spp2Q8K1I3 203 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Wdr74Q8VCG3 384 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 AslQ91YI0 464 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ccdc22Q9JIG7 627 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Dclk1Q9JLM8 756 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Msh5Q9QUM7 833 aa22.93■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Il17dA0A0B4J1G4 205 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Akap5D3YVF0 745 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Gm16427J3QN52 483 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Scg3P47867 471 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 NcstnP57716 708 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Serping1P97290 504 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Mif4gdQ3UBZ5 222 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Gpbp1l1Q6NZP2 473 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Slc39a10Q6P5F6 833 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Bend7Q8BSV3 434 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Dedd2Q8QZV0 330 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ackr4Q924I3 350 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Tmem80Q9D3H0 123 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 S100pbpQ9D5K4 396 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Sun1Q9D666 913 aaKnown RBP22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ccr10Q9JL21 362 aa22.92■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Tnrc18Q80WC3 2878 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Gm3604A0A087WPN2 559 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Fam47eD3YWC7 402 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 EomesO54839 707 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ldb2O55203 373 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Cdh1P09803 884 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 VdrP48281 422 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Atxn7l3bQ3UD01 97 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Zfp791Q497V9 528 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Otol1Q4ZJM7 482 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Arcn1Q5XJY5 511 aaKnown RBP22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Defa-rs10Q64263 91 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Taf1cQ6PDZ2 836 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Hamp2Q80T19 83 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 NemfQ8CCP0 1064 aaKnown RBP22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 VitQ8VHI5 650 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ndufs1Q91VD9 727 aaKnown RBP22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Nrif1Q923B3 828 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Tchhl1Q9D3P1 638 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Kif9Q9WV04 790 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 RecqlQ9Z129 648 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Rps6kb2Q9Z1M4 485 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Pcm1Q9R0L6 2025 aa22.91■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms