RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ZG16	O60844	167 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	ATP2C2	O75185	946 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	DDX5	P17844	614 aa	Known RBP	3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	PIGA	P37287	484 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	USP8	P40818	1118 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	SEC61B	P60468	96 aa	Known RBP	3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	SLC26A9	Q7LBE3	791 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	CHERP	Q8IWX8	916 aa	Known RBP	3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	FTSJ3	Q8IY81	847 aa	Known RBP	3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	PARP16	Q8N5Y8	322 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	KBTBD3	Q8NAB2	608 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	SCCPDH	Q8NBX0	429 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	GJC3	Q8NFK1	279 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	DMBX1	Q8NFW5	382 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	FAM76A	Q8TAV0	307 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	CDCA5	Q96FF9	252 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	CSF3R	Q99062	836 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	CD180	Q99467	661 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	CLSTN3	Q9BQT9	956 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	FAM167B	Q9BTA0	163 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	LRRC1	Q9BTT6	524 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	BARHL1	Q9BZE3	327 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	ZNF696	Q9H7X3	374 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	NOX4	Q9NPH5	578 aa		3.32	□□□□□ -1.88
UBR1-209	ENST00000569243	CACNA1F	O60840	1977 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	VWA3A	A6NCI4	1184 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	SOCS6	O14544	535 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	TCEA3	O75764	348 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	PAX1	P15863	534 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	TRAPPC10	P48553	1259 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	NR0B1	P51843	470 aa	Known RBP	3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	KCNT1	Q5JUK3	1230 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	LCE3E	Q5T5B0	92 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	ANKRD45	Q5TZF3	282 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	CES5A	Q6NT32	575 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	DSG4	Q86SJ6	1040 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	CEP70	Q8NHQ1	597 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	TWNK	Q96RR1	684 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	RPS6KC1	Q96S38	1066 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	LMAN2L	Q9H0V9	348 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	STN1	Q9H668	368 aa	Known RBP	3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	TMEM160	Q9NX00	188 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	CARD8	Q9Y2G2	431 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	SMAD5-AS1	Q9Y6J3	95 aa		3.31	□□□□□ -1.88
UBR1-209	ENST00000569243	GOLGA6L10	A0A0M3HER8	536 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	SH2D7	A6NKC9	451 aa	Predicted RBP	3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	HSPB2	A8KAH6	182 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	CAPN9	O14815	690 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	PRSS1	P07477	247 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	WEE2	P0C1S8	567 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	CDH1	P12830	882 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	SLC2A4	P14672	509 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	GPD2	P43304	727 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	EEF1A1	P68104	462 aa	Known RBP	3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	ITGAD	Q13349	1161 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	PPIG	Q13427	754 aa	Known RBP eCLIP	3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	BIRC2	Q13490	618 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	RUNX2	Q13950	521 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	HSPB2	Q16082	182 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	C10orf62	Q5T681	223 aa	Predicted RBP	3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	MAP3K21	Q5TCX8	1036 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	EEF1A1P5	Q5VTE0	462 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	GFRAL	Q6UXV0	394 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	BBS12	Q6ZW61	710 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	MYPOP	Q86VE0	399 aa	Predicted RBP	3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	C2CD5	Q86YS7	1000 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	LURAP1L	Q8IV03	231 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	WDR63	Q8IWG1	891 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	CIART	Q8N365	385 aa	Predicted RBP	3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	CCT6B	Q92526	530 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	ERGIC1	Q969X5	290 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	C17orf77	Q96MU5	243 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	SH3GL2	Q99962	352 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	KXD1	Q9BQD3	176 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	EPHX3	Q9H6B9	360 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	FAM118A	Q9NWS6	357 aa		3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	CISD1	Q9NZ45	108 aa	Known RBP	3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	3.3	□□□□□ -1.88
UBR1-209	ENST00000569243	KLK8	O60259	260 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	CEP104	O60308	925 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	BAG4	O95429	457 aa	Known RBP	3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	LDHA	P00338	332 aa	Known RBP	3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	TUBB	P07437	444 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	HLA-DOB	P13765	273 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	CD72	P21854	359 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	RRM1	P23921	792 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	FMO5	P49326	533 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	HSD17B4	P51659	736 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	CLCN3	P51790	818 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	CLCNKA	P51800	687 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	TERF1	P54274	439 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	TUBB4B	P68371	445 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	REL	Q04864	619 aa	Predicted RBP	3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	GAGE5	Q13069	117 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	GAGE6	Q13070	117 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	IRAK1BP1	Q5VVH5	260 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	WDR73	Q6P4I2	378 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	B3GNT6	Q6ZMB0	384 aa		3.29	□□□□□ -1.88
UBR1-209	ENST00000569243	KMT5C	Q86Y97	462 aa		3.29	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms