RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 CYP2S1Q96SQ9 504 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 KLF6Q99612 283 aaPredicted RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 HOPXQ9BPY8 73 aaPredicted RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 WDR83Q9BRX9 315 aaKnown RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 NAT9Q9BTE0 207 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 CCDC32Q9BV29 185 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 FUNDC2Q9BWH2 189 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 HEMGNQ9BXL5 484 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 NAA50Q9GZZ1 169 aaKnown RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 LHPPQ9H008 270 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 RSPH9Q9H1X1 276 aaPredicted RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 C12orf65Q9H3J6 166 aaKnown RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 DSN1Q9H410 356 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 SYNDIG1Q9H7V2 258 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 NOL11Q9H8H0 719 aaKnown RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 SPAG4Q9NPE6 437 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 CYP26B1Q9NR63 512 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 GIMAP4Q9NUV9 329 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 TBC1D13Q9NVG8 400 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDH1-203ENST00000561751 RNF181Q9P0P0 153 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 PAK5Q9P286 719 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 TMEM181Q9P2C4 612 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 PGAP2Q9UHJ9 254 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 ATP6V1HQ9UI12 483 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 TRMT6Q9UJA5 497 aaKnown RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 MOSPD1Q9UJG1 213 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 KLHL21Q9UJP4 597 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 POLHQ9Y253 713 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 TRAPPC4Q9Y296 219 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 ANKRD6Q9Y2G4 727 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 MRPL11Q9Y3B7 192 aaKnown RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 PCDHGB2Q9Y5G2 931 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 PCDHGA7Q9Y5G6 932 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 KLF2Q9Y5W3 355 aaPredicted RBP7.29□□□□□ -1.24
CDH1-203ENST00000561751 SNX5Q9Y5X3 404 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 KCNE2Q9Y6J6 123 aa7.29□□□□□ -1.24
CDH1-203ENST00000561751 SCN7AQ01118 1682 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PNMA6FA0A0J9YX94 578 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 RNF103-CHMP3A0A140T963 221 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 TCAF2A6NFQ2 919 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CLDN24A6NM45 220 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 GOLGA8JA6NMD2 632 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 BBIP1A8MTZ0 92 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ZNF99A8MXY4 864 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 SOCS2O14508 198 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 NMT2O60551 498 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CNTN5O94779 1100 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 FAM13AO94988 1023 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 MFN2O95140 757 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 VAPBO95292 243 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 TDP2O95551 362 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PDGFAP04085 211 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 KRT7P08729 469 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 MLNP12872 115 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 STMN1P16949 149 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CRHBPP24387 322 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CHRNA5P30532 468 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ARL1P40616 181 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 MAGEA12P43365 314 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 RPS9P46781 194 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 ST13P50502 369 aaKnown RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 CXCR4P61073 352 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ACTR2P61160 394 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CYP4F2P78329 520 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PRAMEP78395 509 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CHRNDQ07001 517 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 FOXM1Q08050 763 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CYP4F3Q08477 520 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 SPIRE1Q08AE8 756 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 INCA1Q0VD86 236 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 SCRN3Q0VDG4 424 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 SMARCB1Q12824 385 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PRKAA1Q13131 559 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 AP3B2Q13367 1082 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 DNASE1L3Q13609 305 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 STARD3Q14849 445 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PCLAFQ15004 111 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ACAP2Q15057 778 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PLEKHG6Q3KR16 790 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 C4orf17Q53FE4 359 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 MTX3Q5HYI7 312 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 COQ5Q5HYK3 327 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 PAGE2BQ5JRK9 111 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 SUSD4Q5VX71 490 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 STEAP4Q687X5 459 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 LCN8Q6JVE9 175 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ZNF746Q6NUN9 644 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 CCBE1Q6UXH8 406 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 ZNF438Q7Z4V0 828 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 THAP5Q7Z6K1 395 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ADCK1Q86TW2 530 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 NOXA1Q86UR1 476 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 CATSPER3Q86XQ3 398 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 TCTE3Q8IZS6 198 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ZNF444Q8N0Y2 327 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 CBR4Q8N4T8 237 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 BEND7Q8N7W2 519 aaPredicted RBP7.28□□□□□ -1.24
CDH1-203ENST00000561751 POC5Q8NA72 575 aa7.28□□□□□ -1.24
CDH1-203ENST00000561751 ANKRD52Q8NB46 1076 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms