RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 MDGA1Q8NFP4 955 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 RAB7BQ96AH8 199 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 C20orf96Q9NUD7 363 aaPredicted RBP10.91□□□□□ -0.66
PABPN1-203ENST00000553960 KLHL42Q9P2K6 505 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 EVLQ9UI08 416 aaPredicted RBP10.91□□□□□ -0.66
PABPN1-203ENST00000553960 APPL1Q9UKG1 709 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 FBXO5Q9UKT4 447 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 FAM50BQ9Y247 325 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 REV3LO60673 3130 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 FAM47DPA6NHR8 397 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 SOX1O00570 391 aaPredicted RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 PFDN6O15212 129 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 AP1G1O43747 822 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 VAPBO95292 243 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 WISP3O95389 354 aaPredicted RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 S1PR4O95977 384 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 IL1BP01584 269 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 APODP05090 189 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 MPOP05164 745 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 KRT15P19012 456 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 DRD1P21728 446 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 ITGB7P26010 798 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 GDI1P31150 447 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 PPARGP37231 505 aaPredicted RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 MDH1P40925 334 aaKnown RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 KIR2DL1P43626 348 aaPredicted RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 STK19P49842 368 aaPredicted RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 CLCN5P51795 746 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 XIAPP98170 497 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 POU4F1Q01851 419 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 CRY1Q16526 586 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 PCSK7Q16549 785 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 FBXO43Q4G163 708 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 ATXN7L2Q5T6C5 722 aaPredicted RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 C9orf64Q5T6V5 341 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 LYPLAL1Q5VWZ2 237 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 KYAT3Q6YP21 454 aaKnown RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 LEKR1Q6ZMV7 388 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 ZNF765Q7L2R6 523 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 CYP2U1Q7Z449 544 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 CLEC14AQ86T13 490 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 CAMK1DQ8IU85 385 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 STK40Q8N2I9 435 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 OR4L1Q8NH43 312 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 BHMTQ93088 406 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 RMDN1Q96DB5 314 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 RPL10LQ96L21 214 aaKnown RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 SMC6Q96SB8 1091 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 GABRG3Q99928 467 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 HDAC8Q9BY41 377 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 VPS11Q9H270 941 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 SMOXQ9NWM0 555 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 TXNDC16Q9P2K2 825 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 ANKRD6Q9Y2G4 727 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 ZNF711Q9Y462 761 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 SPO11Q9Y5K1 396 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 PSAT1Q9Y617 370 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 NUMBLQ9Y6R0 609 aa10.9□□□□□ -0.66
PABPN1-203ENST00000553960 TCF20Q9UGU0 1960 aaKnown RBP10.9□□□□□ -0.66
PABPN1-203ENST00000553960 IGLV3-16A0A075B6K0 115 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 UPK3BL1B0FP48 263 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 C10orf142B7Z368 130 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 LOC730098B7Z3J9 87 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 TRIM49D1C9J1S8 452 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 UPK3BL2E5RIL1 263 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 AREL1O15033 823 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 GJB3O75712 270 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 AHSGP02765 367 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 MT-ND3P03897 115 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 ALDOAP04075 364 aaKnown RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 ERVK-10P10266 1014 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CYP2A6P11509 494 aaPredicted RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 BRAFP15056 766 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 RPS3P23396 243 aaKnown RBP eCLIP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 GABRB3P28472 473 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CRABP2P29373 138 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 FOXN2P32314 431 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CTHP32929 405 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 ETV4P43268 484 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 SLCO1A2P46721 670 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 SLC6A11P48066 632 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CCT5P48643 541 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 TTPAP49638 278 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 NEK3P51956 506 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 STC1P52823 247 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 PRAMEP78395 509 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 MRPS21P82921 87 aaKnown RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 ZBTB16Q05516 673 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CCDC15Q0P6D6 951 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 THOC5Q13769 683 aaKnown RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 ZNF234Q14588 700 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 FSTL4Q6MZW2 842 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 Q6ZVU0 165 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 TRMT11Q7Z4G4 463 aaKnown RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 GLT6D1Q7Z4J2 308 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 SDCCAG8Q86SQ7 713 aaPredicted RBP10.89□□□□□ -0.67
PABPN1-203ENST00000553960 CTAGE3PQ8IX95 158 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 NRSN1Q8IZ57 195 aa10.89□□□□□ -0.67
PABPN1-203ENST00000553960 SLC44A3Q8N4M1 653 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms